Stochastic calcium mechanisms cause dendritic calcium spike variability (Anwar et al. 2013)


Anwar H, Hepburn I, Nedelescu H, Chen W, De Schutter E. (2013). Stochastic calcium mechanisms cause dendritic calcium spike variability. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

See more from authors: Anwar H · Hepburn I · Nedelescu H · Chen W · De Schutter E

References and models cited by this paper

Antunes G, De Schutter E. (2012). A stochastic signaling network mediates the probabilistic induction of cerebellar long-term depression. The Journal of neuroscience : the official journal of the Society for Neuroscience. 32 [PubMed]

Anwar H, Hong S, De Schutter E. (2012). Controlling Ca2+-activated K+ channels with models of Ca2+ buffering in Purkinje cells. Cerebellum (London, England). 11 [PubMed]

Belmeguenai A et al. (2010). Intrinsic plasticity complements long-term potentiation in parallel fiber input gain control in cerebellar Purkinje cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

Berkefeld H, Fakler B, Schulte U. (2010). Ca2+-activated K+ channels: from protein complexes to function. Physiological reviews. 90 [PubMed]

Bittner KC, Hanck DA. (2008). The relationship between single-channel and whole-cell conductance in the T-type Ca2+ channel CaV3.1. Biophysical journal. 95 [PubMed]

Cannon RC, O'Donnell C, Nolan MF. (2010). Stochastic ion channel gating in dendritic neurons: morphology dependence and probabilistic synaptic activation of dendritic spikes. PLoS computational biology. 6 [PubMed]

Chow CC, White JA. (1996). Spontaneous action potentials due to channel fluctuations. Biophysical journal. 71 [PubMed]

Coesmans M, Weber JT, De Zeeuw CI, Hansel C. (2004). Bidirectional parallel fiber plasticity in the cerebellum under climbing fiber control. Neuron. 44 [PubMed]

Cohen S, Hindmarsh A. (1996). CVODE, a stiff-nonstiff ODE solver in C. Comput Physics. 10

Cornelisse LN, van Elburg RA, Meredith RM, Yuste R, Mansvelder HD. (2007). High speed two-photon imaging of calcium dynamics in dendritic spines: consequences for spine calcium kinetics and buffer capacity. PloS one. 2 [PubMed]

Cox DH, Cui J, Aldrich RW. (1997). Allosteric gating of a large conductance Ca-activated K+ channel. The Journal of general physiology. 110 [PubMed]

Davie JT, Clark BA, Häusser M. (2008). The origin of the complex spike in cerebellar Purkinje cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Davie JT et al. (2006). Dendritic patch-clamp recording. Nature protocols. 1 [PubMed]

Destexhe A, Mainen ZF, Sejnowski TJ. (1994). Synthesis of models for excitable membranes, synaptic transmission and neuromodulation using a common kinetic formalism. Journal of computational neuroscience. 1 [PubMed]

Edgerton JR, Reinhart PH. (2003). Distinct contributions of small and large conductance Ca2+-activated K+ channels to rat Purkinje neuron function. The Journal of physiology. 548 [PubMed]

Eilers J, Augustine GJ, Konnerth A. (1995). Subthreshold synaptic Ca2+ signalling in fine dendrites and spines of cerebellar Purkinje neurons. Nature. 373 [PubMed]

Faisal AA, Laughlin SB. (2007). Stochastic simulations on the reliability of action potential propagation in thin axons. PLoS computational biology. 3 [PubMed]

Fakler B, Adelman JP. (2008). Control of K(Ca) channels by calcium nano/microdomains. Neuron. 59 [PubMed]

Fujita Y. (1968). Activity of dendrites of single Purkinje cells and its relationship to so-called inactivation response in rabbit cerebellum. Journal of neurophysiology. 31 [PubMed]

Gillespie DT. (1977). Exact stochastic simulation of coupled chemical reactions. Journal Of Physical Chemistry. 81

HODGKIN AL, HUXLEY AF. (1952). A quantitative description of membrane current and its application to conduction and excitation in nerve. The Journal of physiology. 117 [PubMed]

Hansel C, Linden DJ. (2000). Long-term depression of the cerebellar climbing fiber--Purkinje neuron synapse. Neuron. 26 [PubMed]

Hepburn I, Chen W, Wils S, De Schutter E. (2012). STEPS: efficient simulation of stochastic reaction-diffusion models in realistic morphologies. BMC systems biology. 6 [PubMed]

Higley MJ, Sabatini BL. (2008). Calcium signaling in dendrites and spines: practical and functional considerations. Neuron. 59 [PubMed]

Hille B. (2001). Ionic Channels of Excitable Membranes.

Hines ML, Carnevale NT. (2001). NEURON: a tool for neuroscientists. The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry. 7 [PubMed]

Hirschberg B, Maylie J, Adelman JP, Marrion NV. (1998). Gating of recombinant small-conductance Ca-activated K+ channels by calcium. The Journal of general physiology. 111 [PubMed]

Hosy E, Piochon C, Teuling E, Rinaldo L, Hansel C. (2011). SK2 channel expression and function in cerebellar Purkinje cells. The Journal of physiology. 589 [PubMed]

Iftinca M et al. (2006). Temperature dependence of T-type calcium channel gating. Neuroscience. 142 [PubMed]

Indriati DW et al. (2013). Quantitative localization of Cav2.1 (P/Q-type) voltage-dependent calcium channels in Purkinje cells: somatodendritic gradient and distinct somatic coclustering with calcium-activated potassium channels. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

Jacobson GA et al. (2005). Subthreshold voltage noise of rat neocortical pyramidal neurones. The Journal of physiology. 564 [PubMed]

Jörntell H, Hansel C. (2006). Synaptic memories upside down: bidirectional plasticity at cerebellar parallel fiber-Purkinje cell synapses. Neuron. 52 [PubMed]

Kamondi A, Acsády L, Buzsáki G. (1998). Dendritic spikes are enhanced by cooperative network activity in the intact hippocampus. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Kaufmann WA et al. (2009). Large-conductance calcium-activated potassium channels in purkinje cell plasma membranes are clustered at sites of hypolemmal microdomains. The Journal of comparative neurology. 515 [PubMed]

Larkum ME, Zhu JJ, Sakmann B. (1999). A new cellular mechanism for coupling inputs arriving at different cortical layers. Nature. 398 [PubMed]

Lee BC et al. (2012). Localization of a site of action for benzofuroindole-induced potentiation of BKCa channels. Molecular pharmacology. 82 [PubMed]

Lev-Ram V, Miyakawa H, Lasser-Ross N, Ross WN. (1992). Calcium transients in cerebellar Purkinje neurons evoked by intracellular stimulation. Journal of neurophysiology. 68 [PubMed]

Llinas R, Nicholson C. (1971). Electrophysiological properties of dendrites and somata in alligator Purkinje cells. Journal of neurophysiology. 34 [PubMed]

Llinás R, Sugimori M. (1980). Electrophysiological properties of in vitro Purkinje cell dendrites in mammalian cerebellar slices. The Journal of physiology. 305 [PubMed]

Marrion NV, Tavalin SJ. (1998). Selective activation of Ca2+-activated K+ channels by co-localized Ca2+ channels in hippocampal neurons. Nature. 395 [PubMed]

Mathy A et al. (2009). Encoding of oscillations by axonal bursts in inferior olive neurons. Neuron. 62 [PubMed]

Miyakawa H, Lev-Ram V, Lasser-Ross N, Ross WN. (1992). Calcium transients evoked by climbing fiber and parallel fiber synaptic inputs in guinea pig cerebellar Purkinje neurons. Journal of neurophysiology. 68 [PubMed]

Momiyama A et al. (2003). The density of AMPA receptors activated by a transmitter quantum at the climbing fibre-Purkinje cell synapse in immature rats. The Journal of physiology. 549 [PubMed]

Ohtsuki G, Piochon C, Adelman JP, Hansel C. (2012). SK2 channel modulation contributes to compartment-specific dendritic plasticity in cerebellar Purkinje cells. Neuron. 75 [PubMed]

Pinsker HM, Bell J. (1981). Phase plane description of endogenous neuronal oscillators in Aplysia. Biological cybernetics. 39 [PubMed]

Prakriya M, Lingle CJ. (1999). BK channel activation by brief depolarizations requires Ca2+ influx through L- and Q-type Ca2+ channels in rat chromaffin cells. Journal of neurophysiology. 81 [PubMed]

Rancz EA, Häusser M. (2006). Dendritic calcium spikes are tunable triggers of cannabinoid release and short-term synaptic plasticity in cerebellar Purkinje neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Rancz EA, Häusser M. (2010). Dendritic spikes mediate negative synaptic gain control in cerebellar Purkinje cells. Proceedings of the National Academy of Sciences of the United States of America. 107 [PubMed]

Rudolph S, Overstreet-Wadiche L, Wadiche JI. (2011). Desynchronization of multivesicular release enhances Purkinje cell output. Neuron. 70 [PubMed]

Salkoff L, Butler A, Ferreira G, Santi C, Wei A. (2006). High-conductance potassium channels of the SLO family. Nature reviews. Neuroscience. 7 [PubMed]

Santamaria F, Wils S, De Schutter E, Augustine GJ. (2006). Anomalous diffusion in Purkinje cell dendrites caused by spines. Neuron. 52 [PubMed]

Schmolesky MT, Weber JT, De Zeeuw CI, Hansel C. (2002). The making of a complex spike: ionic composition and plasticity. Annals of the New York Academy of Sciences. 978 [PubMed]

Schneidman E, Freedman B, Segev I. (1998). Ion channel stochasticity may be critical in determining the reliability and precision of spike timing. Neural computation. 10 [PubMed]

Sekerli M, Del Negro CA, Lee RH, Butera RJ. (2004). Estimating action potential thresholds from neuronal time-series: new metrics and evaluation of methodologies. IEEE transactions on bio-medical engineering. 51 [PubMed]

Solinas S et al. (2007). Computational reconstruction of pacemaking and intrinsic electroresponsiveness in cerebellar Golgi cells. Frontiers in cellular neuroscience. 1 [PubMed]

Stanley DA, Bardakjian BL, Spano ML, Ditto WL. (2011). Stochastic amplification of calcium-activated potassium currents in Ca2+ microdomains. Journal of computational neuroscience. 31 [PubMed]

Steinmetz PN, Manwani A, Koch C, London M, Segev I. (2000). Subthreshold voltage noise due to channel fluctuations in active neuronal membranes. Journal of computational neuroscience. 9 [PubMed]

Storm JF. (1987). Action potential repolarization and a fast after-hyperpolarization in rat hippocampal pyramidal cells. The Journal of physiology. 385 [PubMed]

Swensen AM, Bean BP. (2005). Robustness of burst firing in dissociated purkinje neurons with acute or long-term reductions in sodium conductance. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Usowicz MM, Sugimori M, Cherksey B, Llinás R. (1992). P-type calcium channels in the somata and dendrites of adult cerebellar Purkinje cells. Neuron. 9 [PubMed]

Weiger TM, Hermann A, Levitan IB. (2002). Modulation of calcium-activated potassium channels. Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology. 188 [PubMed]

Widmer HA, Rowe IC, Shipston MJ. (2003). Conditional protein phosphorylation regulates BK channel activity in rat cerebellar Purkinje neurons. The Journal of physiology. 552 [PubMed]

Womack M, Khodakhah K. (2002). Active contribution of dendrites to the tonic and trimodal patterns of activity in cerebellar Purkinje neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

Womack MD, Chevez C, Khodakhah K. (2004). Calcium-activated potassium channels are selectively coupled to P/Q-type calcium channels in cerebellar Purkinje neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

Womack MD, Khodakhah K. (2002). Characterization of large conductance Ca2+-activated K+ channels in cerebellar Purkinje neurons. The European journal of neuroscience. 16 [PubMed]

References and models that cite this paper

Ait Ouares K, Filipis L, Tzilivaki A, Poirazi P, Canepari M. (2019). Two Distinct Sets of Ca2+ and K+ Channels Are Activated at Different Membrane Potentials by the Climbing Fiber Synaptic Potential in Purkinje Neuron Dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 39 [PubMed]

Anwar H et al. (2014). Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Frontiers in cellular neuroscience. 8 [PubMed]

Chen W, De Schutter E. (2014). Python-based geometry preparation and simulation visualization toolkits for STEPS. Frontiers in neuroinformatics. 8 [PubMed]

Chen W, De Schutter E. (2017). Parallel STEPS: Large Scale Stochastic Spatial Reaction-Diffusion Simulation with High Performance Computers. Frontiers in neuroinformatics. 11 [PubMed]

Denizot A, Arizono M, Nägerl UV, Soula H, Berry H. (2019). Simulation of calcium signaling in fine astrocytic processes: Effect of spatial properties on spontaneous activity. PLoS computational biology. 15 [PubMed]

Grein S, Stepniewski M, Reiter S, Knodel MM, Queisser G. (2014). 1D-3D hybrid modeling-from multi-compartment models to full resolution models in space and time. Frontiers in neuroinformatics. 8 [PubMed]

Montefusco F, Tagliavini A, Ferrante M, Pedersen MG. (2017). Concise Whole-Cell Modeling of BKCa-CaV Activity Controlled by Local Coupling and Stoichiometry. Biophysical journal. 112 [PubMed]

Zang Y, Dieudonné S, De Schutter E. (2018). Voltage- and Branch-Specific Climbing Fiber Responses in Purkinje Cells Cell reports. 24 [PubMed]

This website requires cookies and limited processing of your personal data in order to function. By continuing to browse or otherwise use this site, you are agreeing to this use. See our Privacy policy and how to cite and terms of use.