Simulation Environment: STEPS

http://steps.sourceforge.net

STochastic Engine for Pathway Simulation (STEPS) is a package for exact stochastic simulation of reaction-diffusion systems in arbitrarily complex 3D geometries. Our core simulation algorithm is an implementation of Gillespie's SSA, extended to deal with diffusion of molecules over the elements of a 3D tetrahedral mesh. While it was mainly developed for simulating detailed models of neuronal signaling pathways in dendrites and around synapses, it is a general tool and can be used for studying any biochemical pathway in which spatial gradients and morphology are thought to play a role.
Top authors for STEPS:
Top concepts studied with STEPS:
Top neurons studied with STEPS:
Top currents studied with STEPS:
Top references cited by these models:
This website requires cookies and limited processing of your personal data in order to function. By continuing to browse or otherwise use this site, you are agreeing to this use. See our Privacy policy and how to cite and terms of use.