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• Sparse connectivity is required for decorrelation, pattern separation (Cayco-Gajic et al 2017) [Model]

Eglen SJ et al. (2017). Toward standard practices for sharing computer code and programs in neuroscience. Nature neuroscience. 20 [PubMed]

Jȩdrzejewski-Szmek Z, Abrahao KP, Jȩdrzejewska-Szmek J, Lovinger DM, Blackwell KT. (2018). Parameter Optimization Using Covariance Matrix Adaptation-Evolutionary Strategy (CMA-ES), an Approach to Investigate Differences in Channel Properties Between Neuron Subtypes. Frontiers in neuroinformatics. 12 [PubMed]

• Parameter optimization using CMA-ES (Jedrzejewski-Szmek et al 2018) [Model]

Lindroos R et al. (2018). Basal Ganglia Neuromodulation Over Multiple Temporal and Structural Scales-Simulations of Direct Pathway MSNs Investigate the Fast Onset of Dopaminergic Effects and Predict the Role of Kv4.2. Frontiers in neural circuits. 12 [PubMed]

• Striatal D1R medium spiny neuron, including a subcellular DA cascade (Lindroos et al 2018) [Model]

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• Ca2+ oscillations in single astrocytes (Lavrentovich and Hemkin 2008) (python) (Manninen et al 2017) [Model]
• Glutamate-evoked Ca2+ oscillations in single astrocytes (De Pitta et al. 2009) (Manninen et al 2017) [Model]
• Spontaneous calcium oscillations in single astrocytes (Riera et al. 2011) (Manninen et al 2017) [Model]
• Glutamate-evoked Ca2+ oscillations in single astrocytes (Modified from Dupont et al. 2011) [Model]
• Reproducibility and comparability of models for astrocyte Ca2+ excitability (Manninen et al 2017) [Model]

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• Layer V pyramidal cell model with reduced morphology (Mäki-Marttunen et al 2018) [Model]

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