Almog M, Korngreen A. (2014). A Quantitative Description of Dendritic Conductances and Its Application to Dendritic Excitation in Layer 5 Pyramidal Neurons The Journal of neuroscience : the official journal of the Society for Neuroscience. 34 [PubMed]

• Ionic mechanisms of dendritic spikes (Almog and Korngreen 2014) [Model]

Behabadi BF, Mel BW. (2014). Mechanisms underlying subunit independence in pyramidal neuron dendrites. Proceedings of the National Academy of Sciences of the United States of America. 111 [PubMed]

• Mechanisms underlying subunit independence in pyramidal neuron dendrites (Behabadi and Mel 2014) [Model]

Bernander O, Koch C, Douglas RJ. (1994). Amplification and linearization of distal synaptic input to cortical pyramidal cells. Journal of neurophysiology. 72 [PubMed]

Bock T, Negrean A, Siegelbaum SA. (2022). Somatic depolarization enhances hippocampal CA1 dendritic spike propagation and distal input-driven synaptic plasticity The Journal of neuroscience : the official journal of the Society for Neuroscience. 42 [PubMed]

• Depolarization Enhacement of Dendritic Spike Propagation (Bock et al 2022) [Model]

Cauller LJ, Connors BW. (1994). Synaptic physiology of horizontal afferents to layer I in slices of rat SI neocortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 14 [PubMed]

De Schutter E. (1998). Dendritic voltage and calcium-gated channels amplify the variability of postsynaptic responses in a Purkinje cell model. Journal of neurophysiology. 80 [PubMed]

• Cerebellar purkinje cell (De Schutter and Bower 1994) [Model]

De Schutter E, Bower JM. (1994). Simulated responses of cerebellar Purkinje cells are independent of the dendritic location of granule cell synaptic inputs. Proceedings of the National Academy of Sciences of the United States of America. 91 [PubMed]

• Cerebellar purkinje cell (De Schutter and Bower 1994) [Model]

Elaagouby A, Yuste R. (1999). Role of calcium electrogenesis in apical dendrites: generation of intrinsic oscillations by an axial current. Journal of computational neuroscience. 7 [PubMed]

Hay E, Hill S, Schürmann F, Markram H, Segev I. (2011). Models of neocortical layer 5b pyramidal cells capturing a wide range of dendritic and perisomatic active properties. PLoS computational biology. 7 [PubMed]

• L5b PC model constrained for BAC firing and perisomatic current step firing (Hay et al., 2011) [Model]
• Layer V pyramidal cell model with reduced morphology (Mäki-Marttunen et al 2018) [Model]
• Cortical Layer 5b pyr. cell with [Na+]i mechanisms, from Hay et al 2011 (Zylbertal et al 2017) [Model]

Jackson ME, Cauller LJ. (1997). Evaluation of simplified compartmental models of reconstructed neocortical neurons for use in large-scale simulations of biological neural networks. Brain research bulletin. 44 [PubMed]

Keren N, Peled N, Korngreen A. (2005). Constraining compartmental models using multiple voltage recordings and genetic algorithms. Journal of neurophysiology. 94 [PubMed]

Kim HG, Connors BW. (1993). Apical dendrites of the neocortex: correlation between sodium- and calcium-dependent spiking and pyramidal cell morphology. The Journal of neuroscience : the official journal of the Society for Neuroscience. 13 [PubMed]

Korngreen A, Sakmann B. (2000). Voltage-gated K+ channels in layer 5 neocortical pyramidal neurones from young rats: subtypes and gradients. The Journal of physiology. 525 Pt 3 [PubMed]

• Pyramidal Neuron Deep: K+ kinetics (Korngreen, Sakmann 2000) [Model]

Körding KP, König P. (2001). Supervised and unsupervised learning with two sites of synaptic integration. Journal of computational neuroscience. 11 [PubMed]

Mainen ZF, Joerges J, Huguenard JR, Sejnowski TJ. (1995). A model of spike initiation in neocortical pyramidal neurons. Neuron. 15 [PubMed]

• Spike Initiation in Neocortical Pyramidal Neurons (Mainen et al 1995) [Model]

Mel BW. (1993). Synaptic integration in an excitable dendritic tree. Journal of neurophysiology. 70 [PubMed]

Mel BW, Ruderman DL, Archie KA. (1998). Translation-invariant orientation tuning in visual "complex" cells could derive from intradendritic computations. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Pashut T et al. (2011). Mechanisms of magnetic stimulation of central nervous system neurons. PLoS computational biology. 7 [PubMed]

• Mechanisms of magnetic stimulation of central nervous system neurons (Pashut et al. 2011) [Model]

Poirazi P, Brannon T, Mel BW. (2003). Pyramidal neuron as two-layer neural network. Neuron. 37 [PubMed]

• CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Poirazi P, Brannon T, Mel BW. (2003). Online Supplement: About the Model Neuron. 37 Online

• CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Reuveni I, Friedman A, Amitai Y, Gutnick MJ. (1993). Stepwise repolarization from Ca2+ plateaus in neocortical pyramidal cells: evidence for nonhomogeneous distribution of HVA Ca2+ channels in dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 13 [PubMed]

Rhodes PA, Llinás RR. (2001). Apical tuft input efficacy in layer 5 pyramidal cells from rat visual cortex. The Journal of physiology. 536 [PubMed]

Schaefer AT et al. (2007). Dendritic voltage-gated K+ conductance gradient in pyramidal neurones of neocortical layer 5B from rats. The Journal of physiology. 579 [PubMed]

• Correcting space clamp in dendrites (Schaefer et al. 2003 and 2007) [Model]

Segev I, Rall W. (1998). Excitable dendrites and spines: earlier theoretical insights elucidate recent direct observations. Trends in neurosciences. 21 [PubMed]

Softky W. (1994). Sub-millisecond coincidence detection in active dendritic trees. Neuroscience. 58 [PubMed]

Softky WR, Koch C. (1993). The highly irregular firing of cortical cells is inconsistent with temporal integration of random EPSPs. The Journal of neuroscience : the official journal of the Society for Neuroscience. 13 [PubMed]

Stuart G, Spruston N, Sakmann B, Häusser M. (1997). Action potential initiation and backpropagation in neurons of the mammalian CNS. Trends in neurosciences. 20 [PubMed]

Traub RD, Buhl EH, Gloveli T, Whittington MA. (2003). Fast rhythmic bursting can be induced in layer 2/3 cortical neurons by enhancing persistent Na+ conductance or by blocking BK channels. Journal of neurophysiology. 89 [PubMed]

• Mechanisms of fast rhythmic bursting in a layer 2/3 cortical neuron (Traub et al 2003) [Model]

Traub RD, Contreras D, Whittington MA. (2005). Combined experimental/simulation studies of cellular and network mechanisms of epileptogenesis in vitro and in vivo. Journal of clinical neurophysiology : official publication of the American Electroencephalographic Society. 22 [PubMed]

• A single column thalamocortical network model (Traub et al 2005) [Model]
• Collection of simulated data from a thalamocortical network model (Glabska, Chintaluri, Wojcik 2017) [Model]

Vetter P, Roth A, Häusser M. (2001). Propagation of action potentials in dendrites depends on dendritic morphology. Journal of neurophysiology. 85 [PubMed]

• Dendritica (Vetter et al 2001) [Model]

Yang CR, Seamans JK, Gorelova N. (1999). Developing a neuronal model for the pathophysiology of schizophrenia based on the nature of electrophysiological actions of dopamine in the prefrontal cortex. Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. 21 [PubMed]