Bazhenov M, Timofeev I, Steriade M, Sejnowski TJ. (1998). Computational models of thalamocortical augmenting responses. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

• Thalamocortical augmenting response (Bazhenov et al 1998) [Model]

Bazhenov M, Timofeev I, Steriade M, Sejnowski TJ. (2002). Model of thalamocortical slow-wave sleep oscillations and transitions to activated States. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

• Sleep-wake transitions in corticothalamic system (Bazhenov et al 2002) [Model]

Benucci A, Verschure PF, König P. (2004). Two-state membrane potential fluctuations driven by weak pairwise correlations. Neural computation. 16 [PubMed]

Blethyn KL, Hughes SW, Tóth TI, Cope DW, Crunelli V. (2006). Neuronal basis of the slow (<1 Hz) oscillation in neurons of the nucleus reticularis thalami in vitro. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Cunningham MO et al. (2006). Neuronal metabolism governs cortical network response state. Proceedings of the National Academy of Sciences of the United States of America. 103 [PubMed]

Destexhe A. (2009). Self-sustained asynchronous irregular states and Up-Down states in thalamic, cortical and thalamocortical networks of nonlinear integrate-and-fire neurons. Journal of computational neuroscience. 27 [PubMed]

• Asynchronous irregular and up/down states in excitatory and inhibitory NNs (Destexhe 2009) [Model]

Destexhe A, Contreras D, Steriade M. (1998). Mechanisms underlying the synchronizing action of corticothalamic feedback through inhibition of thalamic relay cells. Journal of neurophysiology. 79 [PubMed]

• Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001) [Model]

Destexhe A, Contreras D, Steriade M. (2001). LTS cells in cerebral cortex and their role in generating spike-and-wave oscillations. Neurocomputing. 38

• Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001) [Model]

Destexhe A, Contreras D, Steriade M, Sejnowski TJ, Huguenard JR. (1996). In vivo, in vitro, and computational analysis of dendritic calcium currents in thalamic reticular neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 16 [PubMed]

• Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996) [Model]

Destexhe A, Ho N, Kroger H. (2000). Consequences of correlated synaptic bombardment on the responsiveness of neocortical pyramidal neurons. Neurocomputing. 32

Destexhe A, Sejnowski TJ. (2003). Interactions between membrane conductances underlying thalamocortical slow-wave oscillations. Physiological reviews. 83 [PubMed]

Fellous JM, Rudolph M, Destexhe A, Sejnowski TJ. (2003). Synaptic background noise controls the input/output characteristics of single cells in an in vitro model of in vivo activity. Neuroscience. 122 [PubMed]

Goldberg JA, Rokni U, Sompolinsky H. (2004). Patterns of ongoing activity and the functional architecture of the primary visual cortex. Neuron. 42 [PubMed]

• A theory of ongoing activity in V1 (Goldberg et al 2004) [Model]

Hô N, Destexhe A. (2000). Synaptic background activity enhances the responsiveness of neocortical pyramidal neurons. Journal of neurophysiology. 84 [PubMed]

Jercog D et al. (2017). UP-DOWN cortical dynamics reflect state transitions in a bistable network. eLife. 6 [PubMed]

• Models for cortical UP-DOWN states in a bistable inhibitory-stabilized network (Jercog et al 2017) [Model]

Jones SR et al. (2009). Quantitative analysis and biophysically realistic neural modeling of the MEG mu rhythm: rhythmogenesis and modulation of sensory-evoked responses. Journal of neurophysiology. 102 [PubMed]

• Biophysically realistic neural modeling of the MEG mu rhythm (Jones et al. 2009) [Model]

Komarov M et al. (2018). New class of reduced computationally efficient neuronal models for large-scale simulations of brain dynamics. Journal of computational neuroscience. 44 [PubMed]

Krishnan GP et al. (2016). Cellular and neurochemical basis of sleep stages in the thalamocortical network. eLife. 5 [PubMed]

• Thalamocortical sleep model (Fink et. al., 2024, and Krishnan et al., 2016) [Model]

Li G, Henriquez CS, Fröhlich F. (2017). Unified Thalamic Model Generates Multiple Distinct Oscillations with State-dependent Entrainment by Stimulation PLOS Computational Biology. 13(10)

• A unified thalamic model of multiple distinct oscillations (Li, Henriquez and Fröhlich 2017) [Model]

Pospischil M et al. (2008). Minimal Hodgkin-Huxley type models for different classes of cortical and thalamic neurons. Biological cybernetics. 99 [PubMed]

• Hodgkin-Huxley models of different classes of cortical neurons (Pospischil et al. 2008) [Model]

Schellenberger Costa M et al. (2016). A Thalamocortical Neural Mass Model of the EEG during NREM Sleep and Its Response to Auditory Stimulation. PLoS computational biology. 12 [PubMed]

• Neural mass model of spindle generation in the isolated thalamus (Schellenberger Costa et al. 2016) [Model]
• Neural mass model of the sleeping thalamocortical system (Schellenberger Costa et al 2016) [Model]

Sejnowski TJ, Destexhe A. (2000). Why do we sleep? Brain research. 886 [PubMed]

Tomov P, Pena RF, Roque AC, Zaks MA. (2016). Mechanisms of Self-Sustained Oscillatory States in Hierarchical Modular Networks with Mixtures of Electrophysiological Cell Types. Frontiers in computational neuroscience. 10 [PubMed]

• Dynamics in random NNs with multiple neuron subtypes (Pena et al 2018, Tomov et al 2014, 2016) [Model]

Vierling-Claassen D, Cardin JA, Moore CI, Jones SR. (2010). Computational modeling of distinct neocortical oscillations driven by cell-type selective optogenetic drive: separable resonant circuits controlled by low-threshold spiking and fast-spiking interneurons. Frontiers in human neuroscience. 4 [PubMed]

• Engaging distinct oscillatory neocortical circuits (Vierling-Claassen et al. 2010) [Model]