Angulo SL et al. (2017). Tau and amyloid-related pathologies in the entorhinal cortex have divergent effects in the hippocampal circuit. Neurobiology of disease. 108 [PubMed]

Bhalla US. (2011). Multiscale interactions between chemical and electric signaling in LTP induction, LTP reversal and dendritic excitability. Neural networks : the official journal of the International Neural Network Society. 24 [PubMed]

• Multiscale interactions between chemical and electric signaling in LTP (Bhalla 2011) [Model]

Delgado JY, Gómez-González JF, Desai NS. (2010). Pyramidal neuron conductance state gates spike-timing-dependent plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

• Pyramidal neuron conductances state and STDP (Delgado et al. 2010) [Model]

Ebner C, Clopath C, Jedlicka P, Cuntz H. (2019). Unifying Long-Term Plasticity Rules for Excitatory Synapses by Modeling Dendrites of Cortical Pyramidal Neurons. Cell reports. 29 [PubMed]

• Four-pathway phenomenological synaptic plasticity model (Ebner et al. 2019) [Model]

Farokhniaee A, McIntyre CC. (2019). Theoretical principles of deep brain stimulation induced synaptic suppression. Brain stimulation. 12 [PubMed]

• Theoretical principles of DBS induced synaptic suppression (Farokhniaee & McIntyre 2019) [Model]

Gilson M, Masquelier T, Hugues E. (2011). STDP allows fast rate-modulated coding with Poisson-like spike trains. PLoS computational biology. 7 [PubMed]

• STDP allows fast rate-modulated coding with Poisson-like spike trains (Gilson et al. 2011) [Model]

Hazan L, Ziv NE. (2020). Activity dependent and independent determinants of synaptic size diversity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 40 [PubMed]

• Kesten and Langevin synaptic size fluctuation simulator (Hazan & Ziv 2020) [Model]
• Mesoscopic model of spontaneous synaptic size fluctuations (Hazan & Ziv 2020) [Model]

Kastellakis G, Silva AJ, Poirazi P. (2016). Linking Memories across Time via Neuronal and Dendritic Overlaps in Model Neurons with Active Dendrites. Cell reports. 17 [PubMed]

• Model of memory linking through memory allocation (Kastellakis et al. 2016) [Model]
• Locus Coeruleus blocking model (Chowdhury et al.) [Model]

Rowan MS, Neymotin SA. (2013). Synaptic Scaling Balances Learning in a Spiking Model of Neocortex Adaptive and Natural Computing Algorithms. 7824

• Synaptic scaling balances learning in a spiking model of neocortex (Rowan & Neymotin 2013) [Model]

Rowan MS, Neymotin SA, Lytton WW. (2014). Electrostimulation to reduce synaptic scaling driven progression of Alzheimer's disease. Frontiers in computational neuroscience. 8 [PubMed]

• Electrostimulation to reduce synaptic scaling driven progression of Alzheimers (Rowan et al. 2014) [Model]

Ruijter BJ, Hofmeijer J, Meijer HGE, van Putten MJAM. (2017). Synaptic damage underlies EEG abnormalities in postanoxic encephalopathy: A computational study. Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. 128 [PubMed]

• Synaptic damage underlies EEG abnormalities in postanoxic encephalopathy (Ruijter et al 2017) [Model]

Toyoizumi T, Kaneko M, Stryker MP, Miller KD. (2014). Modeling the dynamic interaction of Hebbian and homeostatic plasticity. Neuron. 84 [PubMed]

• Modeling hebbian and homeostatic plasticity (Toyoizumi et al. 2014) [Model]

Tzilivaki A, Kastellakis G, Poirazi P. (2019). Challenging the point neuron dogma: FS basket cells as 2-stage nonlinear integrators Nature communications. 10 [PubMed]

• Fast Spiking Basket cells (Tzilivaki et al 2019) [Model]

Ullah G, Cressman JR, Barreto E, Schiff SJ. (2009). The influence of sodium and potassium dynamics on excitability, seizures, and the stability of persistent states. II. Network and glial dynamics. Journal of computational neuroscience. 26 [PubMed]

• Network model with dynamic ion concentrations (Ullah et al. 2009) [Model]