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• Distinct current modules shape cellular dynamics in model neurons (Alturki et al 2016) [Model]

Anderson WD, Makadia HK, Vadigepalli R. (2016). Molecular variability elicits a tunable switch with discrete neuromodulatory response phenotypes. Journal of computational neuroscience. 40 [PubMed]

• Cell signaling/ion channel variability effects on neuronal response (Anderson, Makadia, et al. 2015) [Model]

Aumentado-Armstrong T, Metzen MG, Sproule MK, Chacron MJ. (2015). Electrosensory Midbrain Neurons Display Feature Invariant Responses to Natural Communication Stimuli. PLoS computational biology. 11 [PubMed]

• Midbrain torus semicircularis neuron model (Aumentado-Armstrong et al. 2015) [Model]

Balachandar A, Prescott SA. (2018). Origin of heterogeneous spiking patterns from continuously distributed ion channel densities: a computational study in spinal dorsal horn neurons. The Journal of physiology. 596 [PubMed]

• Origin of heterogeneous spiking patterns in spinal dorsal horn neurons (Balachandar & Prescott 2018) [Model]

Borisyuk R, Al Azad AK, Conte D, Roberts A, Soffe SR. (2014). A developmental approach to predicting neuronal connectivity from small biological datasets: a gradient-based neuron growth model. PloS one. 9 [PubMed]

• Model of the Xenopus tadpole swimming spinal network (Roberts et al. 2014) [Model]

Brette R. (2012). Computing with neural synchrony. PLoS computational biology. 8 [PubMed]

• Computing with neural synchrony (Brette 2012) [Model]

Buchin A, Chizhov A, Huberfeld G, Miles R, Gutkin BS. (2016). Reduced Efficacy of the KCC2 Cotransporter Promotes Epileptic Oscillations in a Subiculum Network Model. The Journal of neuroscience : the official journal of the Society for Neuroscience. 36 [PubMed]

• Subiculum network model with dynamic chloride/potassium homeostasis (Buchin et al 2016) [Model]

Caplan JS, Williams AH, Marder E. (2014). Many parameter sets in a multicompartment model oscillator are robust to temperature perturbations. The Journal of neuroscience : the official journal of the Society for Neuroscience. 34 [PubMed]

• Temperature-Dependent Pyloric Pacemaker Kernel (Caplan JS et al., 2014) [Model]

De Schutter E. (2014). The dangers of plug-and-play simulation using shared models. Neuroinformatics. 12 [PubMed]

Günay C et al. (2015). Distal spike initiation zone location estimation by morphological simulation of ionic current filtering demonstrated in a novel model of an identified Drosophila motoneuron. PLoS computational biology. 11 [PubMed]

• Drosophila 3rd instar larval aCC motoneuron (Gunay et al. 2015) [Model]

Huang C, Zeldenrust F, Celikel T. (2022). Cortical Representation of Touch in Silico Neuroinformatics. 20 [PubMed]

• Realistic barrel cortical column - Matlab (Huang et al., 2022) [Model]
• Realistic barrel cortical column - NetPyNE (Huang et al., 2022) [Model]

Mukunda CL, Narayanan R. (2017). Degeneracy in the regulation of short-term plasticity and synaptic filtering by presynaptic mechanisms. The Journal of physiology. 595 [PubMed]

• Conductance based model for short term plasticity at CA3-CA1 synapses (Mukunda & Narayanan 2017) [Model]

Naze S, Bernard C, Jirsa V. (2015). Computational modeling of seizure dynamics using coupled neuronal networks: factors shaping epileptiform activity. PLoS computational biology. 11 [PubMed]

• Multiscale modeling of epileptic seizures (Naze et al. 2015) [Model]

Ratté S, Zhu Y, Lee KY, Prescott SA. (2014). Criticality and degeneracy in injury-induced changes in primary afferent excitability and the implications for neuropathic pain. eLife. 3 [PubMed]

• Criticality,degeneracy in injury-induced changes in primary afferent excitability (Ratte et al 2014) [Model]

Rich S, Moradi Chameh H, Sekulic V, Valiante TA, Skinner FK. (2021). Modeling Reveals Human-Rodent Differences in H-Current Kinetics Influencing Resonance in Cortical Layer 5 Neurons. Cerebral cortex (New York, N.Y. : 1991). 31 [PubMed]

• Human Cortical L5 Pyramidal Cell (Rich et al. 2021) [Model]

Rindner DJ, Proddutur A, Lur G. (2022). Cell-type specific integration of feedforward and feedback synaptic inputs in the posterior parietal cortex Neuron. 110 [PubMed]

• Cell-type specific integration of feedforward and feedback synaptic inputs (Ridner et al, 2022) [Model]

Rumbell T, Kozloski J. (2019). Dimensions of control for subthreshold oscillations and spontaneous firing in dopamine neurons PLOS Computational Biology. 15

• Control of oscillations and spontaneous firing in dopamine neurons (Rumbell & Kozloski 2019) [Model]

Sekulić V, Chen TC, Lawrence JJ, Skinner FK. (2015). Dendritic distributions of I h channels in experimentally-derived multi-compartment models of oriens-lacunosum/moleculare (O-LM) hippocampal interneurons. Frontiers in synaptic neuroscience. 7 [PubMed]

• Multi-comp. CA1 O-LM interneuron model with varying dendritic Ih distributions (Sekulic et al 2015) [Model]

Solanka L, van Rossum MC, Nolan MF. (2015). Noise promotes independent control of gamma oscillations and grid firing within recurrent attractor networks. eLife. 4 [PubMed]

• Noise promotes independent control of gamma oscillations and grid firing (Solanka et al 2015) [Model]

Tomko M, Benuskova L, Jedlicka P. (2021). A new reduced-morphology model for CA1 pyramidal cells and its validation and comparison with other models using HippoUnit. Scientific reports. 11 [PubMed]

• Reduced-morphology model of CA1 pyramidal cells optimized + validated w/ HippoUnit (Tomko et al '21) [Model]

Webster-Wood VA, Gill JP, Thomas PJ, Chiel HJ. (2020). Control for multifunctionality: bioinspired control based on feeding in Aplysia californica. Biological cybernetics. 114 [PubMed]

• Multifunctional control of feeding in Aplysia (Webster-Wood et al. 2020) [Model]

Yang J, Shakil H, Ratté S, Prescott SA. (2022). Minimal requirements for a neuron to co-regulate many properties and the implications for ion channel correlations and robustness eLife. 11 [PubMed]

• A modified Morris-Lecar model with gM and gAHP (Yang et al., 2022) [Model]