Arkhipov A et al. (2018). Visual physiology of the layer 4 cortical circuit in silico. PLoS computational biology. 14 [PubMed]

• Visual physiology of the layer 4 cortical circuit in silico (Arkhipov et al 2018) [Model]

Beerendonk L et al. (2024). A disinhibitory circuit mechanism explains a general principle of peak performance during mid-level arousal. Proceedings of the National Academy of Sciences of the United States of America. 121 [PubMed]

• Disinhibitory circuit for arousal effects in perceptual decision making tasks (Beerendonk et al., 2024) [Model]

Bilash OM, Chavlis S, Johnson CD, Poirazi P, Basu J. (2023). Lateral entorhinal cortex inputs modulate hippocampal dendritic excitability by recruiting a local disinhibitory microcircuit. Cell reports. 42 [PubMed]

• Hippocampal CA1 microcircuit model including somatic and dendritic inhibition (Bilash et al, 2023) [Model]

Bloss EB et al. (2016). Structured Dendritic Inhibition Supports Branch-Selective Integration in CA1 Pyramidal Cells. Neuron. 89 [PubMed]

• CA1 pyramidal neuron synaptic integration (Bloss et al. 2016) [Model]

Gal E et al. (2017). Rich cell-type-specific network topology in neocortical microcircuitry. Nature neuroscience. 20 [PubMed]

• The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

Hay E, Segev I. (2015). Dendritic Excitability and Gain Control in Recurrent Cortical Microcircuits. Cerebral cortex (New York, N.Y. : 1991). 25 [PubMed]

• Microcircuits of L5 thick tufted pyramidal cells (Hay & Segev 2015) [Model]
• Layer V pyramidal cell model with reduced morphology (Mäki-Marttunen et al 2018) [Model]

Linaro D, Ocker GK, Doiron B, Giugliano M. (2019). Correlation Transfer by Layer 5 Cortical Neurons Under Recreated Synaptic Inputs In Vitro. The Journal of neuroscience : the official journal of the Society for Neuroscience. 39 [PubMed]

• L5 cortical neurons with recreated synaptic inputs in vitro correlation transfer (Linaro et al 2019) [Model]

Papasavvas CA, Trevelyan AJ, Kaiser M, Wang Y. (2020). Divisive gain modulation enables flexible and rapid entrainment in a neocortical microcircuit model. Journal of neurophysiology. 123 [PubMed]

• Entrainment and divisive inhibition in a neocortical neural mass model (Papasavvas et al 2020) [Model]

Sadeh S, Clopath C. (2020). Theory of neuronal perturbome in cortical networks Proceedings of the National Academy of Sciences of the United States of America. 117 [PubMed]

• A computational model of single-neuron perturbations (Sadeh and Clopath 2020) [Model]

Sadeh S, Clopath C, Rotter S. (2015). Emergence of Functional Specificity in Balanced Networks with Synaptic Plasticity. PLoS computational biology. 11 [PubMed]

• Functional balanced networks with synaptic plasticity (Sadeh et al, 2015) [Model]

Schmidt M et al. (2018). A multi-scale layer-resolved spiking network model of resting-state dynamics in macaque visual cortical areas. PLoS computational biology. 14 [PubMed]

• Multi-area layer-resolved spiking network model of resting-state dynamics in macaque visual cortex [Model]

Veit J, Hakim R, Jadi MP, Sejnowski TJ, Adesnik H. (2017). Cortical gamma band synchronization through somatostatin interneurons. Nature neuroscience. 20 [PubMed]

Wilmes KA, Clopath C. (2019). Inhibitory microcircuits for top-down plasticity of sensory representations. Nature communications. 10 [PubMed]

• Inhibitory microcircuits for top-down plasticity of sensory representations (Wilmes & Clopath 2019) [Model]

Yang GR, Murray JD, Wang XJ. (2016). A dendritic disinhibitory circuit mechanism for pathway-specific gating. Nature communications. 7 [PubMed]

• A dendritic disinhibitory circuit mechanism for pathway-specific gating (Yang et al. 2016) [Model]