Baccus SA, Sahley CL, Muller KJ. (2001). Multiple sites of action potential initiation increase neuronal firing rate. Journal of neurophysiology. 86 [PubMed]

Bartos M, Vida I, Frotscher M, Geiger JR, Jonas P. (2001). Rapid signaling at inhibitory synapses in a dentate gyrus interneuron network. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

• Dentate Basket Cell: spatial summation of inhibitory synaptic inputs (Bartos et al 2001) [Model]

Bellinger SC, Miyazawa G, Steinmetz PN. (2008). Submyelin potassium accumulation may functionally block subsets of local axons during deep brain stimulation: a modeling study. Journal of neural engineering. 5 [PubMed]

• Submyelin Potassium accumulation in Subthalamic neuron (STN) axons (Bellinger et al. 2008) [Model]

Carrillo RR, Ros E, Barbour B, Boucheny C, Coenen O. (2007). Event-driven simulation of neural population synchronization facilitated by electrical coupling. Bio Systems. 87 [PubMed]

Chow CC, Kopell N. (2000). Dynamics of spiking neurons with electrical coupling. Neural computation. 12 [PubMed]

Devor A, Yarom Y. (2002). Electrotonic coupling in the inferior olivary nucleus revealed by simultaneous double patch recordings. Journal of neurophysiology. 87 [PubMed]

Ermentrout GB, Terman DH. (2010). Mathematical Foundations of Neuroscience Interdisciplinary Applied Mathematics. 35

• Mathematical Foundations of Neuroscience (Ermentrout and Terman 2010) [Model]

Hass J, Hertäg L, Durstewitz D. (2016). A Detailed Data-Driven Network Model of Prefrontal Cortex Reproduces Key Features of In Vivo Activity. PLoS computational biology. 12 [PubMed]

• A detailed data-driven network model of prefrontal cortex (Hass et al 2016) [Model]

Hayut I, Fanselow EE, Connors BW, Golomb D. (2011). LTS and FS inhibitory interneurons, short-term synaptic plasticity, and cortical circuit dynamics. PLoS computational biology. 7 [PubMed]

• Rate model of a cortical RS-FS-LTS network (Hayut et al. 2011) [Model]

Helmstaedter M, Sakmann B, Feldmeyer D. (2009). The relation between dendritic geometry, electrical excitability, and axonal projections of L2/3 interneurons in rat barrel cortex. Cerebral cortex (New York, N.Y. : 1991). 19 [PubMed]

• Axonal Projection and Interneuron Types (Helmstaedter et al. 2008) [Model]

Helmstaedter M, Staiger JF, Sakmann B, Feldmeyer D. (2008). Efficient recruitment of layer 2/3 interneurons by layer 4 input in single columns of rat somatosensory cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

• Axonal Projection and Interneuron Types (Helmstaedter et al. 2008) [Model]

Higley MJ, Contreras D. (2006). Balanced excitation and inhibition determine spike timing during frequency adaptation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Hopfield JJ, Brody CD. (2001). What is a moment? Transient synchrony as a collective mechanism for spatiotemporal integration. Proceedings of the National Academy of Sciences of the United States of America. 98 [PubMed]

• Hopfield and Brody model (Hopfield, Brody 2000) [Model]
• Hopfield and Brody model (Hopfield, Brody 2000) (NEURON+python) [Model]

Houweling AR et al. (2002). Frequency-selective augmenting responses by short-term synaptic depression in cat neocortex. The Journal of physiology. 542 [PubMed]

Huang C, Zeldenrust F, Celikel T. (2022). Cortical Representation of Touch in Silico Neuroinformatics. 20 [PubMed]

• Realistic barrel cortical column - Matlab (Huang et al., 2022) [Model]
• Realistic barrel cortical column - NetPyNE (Huang et al., 2022) [Model]

Izhikevich EM. (2003). Simple model of spiking neurons. IEEE transactions on neural networks. 14 [PubMed]

• Artificial neuron model (Izhikevich 2003, 2004, 2007) [Model]

Izhikevich EM. (2004). Which model to use for cortical spiking neurons? IEEE transactions on neural networks. 15 [PubMed]

• Artificial neuron model (Izhikevich 2003, 2004, 2007) [Model]

Kubota Y et al. (2015). Functional effects of distinct innervation styles of pyramidal cells by fast spiking cortical interneurons. eLife. 4 [PubMed]

• A Layer V CCS type pyramidal cell, inhibitory synapse current conduction (Kubota Y et al., 2015) [Model]

Maex R, De Schutter E. (2003). Resonant synchronization in heterogeneous networks of inhibitory neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

• Fast oscillations in inhibitory networks (Maex, De Schutter 2003) [Model]

Minneci F et al. (2007). Signaling properties of stratum oriens interneurons in the hippocampus of transgenic mice expressing EGFP in a subset of somatostatin-containing cells. Hippocampus. 17 [PubMed]

• CA1 oriens alveus interneurons: signaling properties (Minneci et al. 2007) [Model]

Morita K. (2008). Possible role of dendritic compartmentalization in the spatial working memory circuit. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

• Working memory circuit with branched dendrites (Morita 2008) [Model]

Pernelle G, Nicola W, Clopath C. (2018). Gap junction plasticity as a mechanism to regulate network-wide oscillations. PLoS computational biology. 14 [PubMed]

• Gap junction plasticity as a mechanism to regulate network-wide oscillations (Pernelle et al 2018) [Model]

Pfeuty B, Mato G, Golomb D, Hansel D. (2003). Electrical synapses and synchrony: the role of intrinsic currents. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Pfeuty B, Mato G, Golomb D, Hansel D. (2005). The combined effects of inhibitory and electrical synapses in synchrony. Neural computation. 17 [PubMed]

Rindner DJ, Proddutur A, Lur G. (2022). Cell-type specific integration of feedforward and feedback synaptic inputs in the posterior parietal cortex Neuron. 110 [PubMed]

• Cell-type specific integration of feedforward and feedback synaptic inputs (Ridner et al, 2022) [Model]

Saraga F, Skinner FK. (2004). Location, location, location (and density) of gap junctions in multi-compartment models. Neurocomputing. 58-60

Schoppa NE, Westbrook GL. (2002). AMPA autoreceptors drive correlated spiking in olfactory bulb glomeruli. Nature neuroscience. 5 [PubMed]

Shelley M, McLaughlin D. (2002). Coarse-grained reduction and analysis of a network model of cortical response: I. Drifting grating stimuli. Journal of computational neuroscience. 12 [PubMed]

Shelley M, McLaughlin D, Shapley R, Wielaard J. (2002). States of high conductance in a large-scale model of the visual cortex. Journal of computational neuroscience. 13 [PubMed]

Shelley MJ, Tao L. (2001). Efficient and accurate time-stepping schemes for integrate-and-fire neuronal networks. Journal of computational neuroscience. 11 [PubMed]

Sohal VS, Huguenard JR. (2005). Inhibitory coupling specifically generates emergent gamma oscillations in diverse cell types. Proceedings of the National Academy of Sciences of the United States of America. 102 [PubMed]

Spencer KM. (2009). The functional consequences of cortical circuit abnormalities on gamma oscillations in schizophrenia: insights from computational modeling. Frontiers in human neuroscience. 3 [PubMed]

• Functional consequences of cortical circuit abnormalities on gamma in schizophrenia (Spencer 2009) [Model]

Szoboszlay M et al. (2016). Functional Properties of Dendritic Gap Junctions in Cerebellar Golgi Cells. Neuron. 90 [PubMed]

• Functional properties of dendritic gap junctions in Cerebellar Golgi cells (Szoboszlay et al. 2016) [Model]

Tiesinga PH. (2005). Stimulus competition by inhibitory interference. Neural computation. 17 [PubMed]

Tiesinga PH, Fellous JM, José JV, Sejnowski TJ. (2002). Information transfer in entrained cortical neurons. Network (Bristol, England). 13 [PubMed]

Traub RD, Bibbig R, Piechotta A, Draguhn R, Schmitz D. (2001). Synaptic and nonsynaptic contributions to giant ipsps and ectopic spikes induced by 4-aminopyridine in the hippocampus in vitro. Journal of neurophysiology. 85 [PubMed]

Traub RD, Buhl EH, Gloveli T, Whittington MA. (2003). Fast rhythmic bursting can be induced in layer 2/3 cortical neurons by enhancing persistent Na+ conductance or by blocking BK channels. Journal of neurophysiology. 89 [PubMed]

• Mechanisms of fast rhythmic bursting in a layer 2/3 cortical neuron (Traub et al 2003) [Model]

Traub RD et al. (2005). Single-column thalamocortical network model exhibiting gamma oscillations, sleep spindles, and epileptogenic bursts. Journal of neurophysiology. 93 [PubMed]

• A single column thalamocortical network model (Traub et al 2005) [Model]
• Collection of simulated data from a thalamocortical network model (Glabska, Chintaluri, Wojcik 2017) [Model]

Traub RD et al. (2001). Gap junctions between interneuron dendrites can enhance synchrony of gamma oscillations in distributed networks. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

Traub RD et al. (2003). Contrasting roles of axonal (pyramidal cell) and dendritic (interneuron) electrical coupling in the generation of neuronal network oscillations. Proceedings of the National Academy of Sciences of the United States of America. 100 [PubMed]

Traub RD et al. (2005). Transient depression of excitatory synapses on interneurons contributes to epileptiform bursts during gamma oscillations in the mouse hippocampal slice. Journal of neurophysiology. 94 [PubMed]

Tucker TR, Katz LC. (2003). Recruitment of local inhibitory networks by horizontal connections in layer 2/3 of ferret visual cortex. Journal of neurophysiology. 89 [PubMed]

Vazquez Y, Mendez B, Trueta C, De-Miguel FF. (2009). Summation of excitatory postsynaptic potentials in electrically-coupled neurones. Neuroscience. 163 [PubMed]

• Electrically-coupled Retzius neurons (Vazquez et al. 2009) [Model]

Veredas FJ, Vico FJ, Alonso JM. (2005). Factors determining the precision of the correlated firing generated by a monosynaptic connection in the cat visual pathway. The Journal of physiology. 567 [PubMed]

Vervaeke K et al. (2010). Rapid desynchronization of an electrically coupled interneuron network with sparse excitatory synaptic input. Neuron. 67 [PubMed]

• Rapid desynchronization of an electrically coupled Golgi cell network (Vervaeke et al. 2010) [Model]

Xiang Z, Huguenard JR, Prince DA. (2002). Synaptic inhibition of pyramidal cells evoked by different interneuronal subtypes in layer v of rat visual cortex. Journal of neurophysiology. 88 [PubMed]