Acker CD, Antic SD. (2009). Quantitative assessment of the distributions of membrane conductances involved in action potential backpropagation along basal dendrites. Journal of neurophysiology. 101 [PubMed]

• Excitability of PFC Basal Dendrites (Acker and Antic 2009) [Model]

Aghvami SS, Müller M, Araabi BN, Egger V. (2019). Coincidence Detection within the Excitable Rat Olfactory Bulb Granule Cell Spines. The Journal of neuroscience : the official journal of the Society for Neuroscience. 39 [PubMed]

• Coincident signals in Olfactory Bulb Granule Cell spines (Aghvami et al 2019) [Model]

Antunes G, Faria da Silva SF, Simoes de Souza FM. (2018). Mirror Neurons Modeled Through Spike-Timing-Dependent Plasticity are Affected by Channelopathies Associated with Autism Spectrum Disorder. International journal of neural systems. 28 [PubMed]

• Mirror Neuron (Antunes et al 2017) [Model]

Bono J, Clopath C. (2017). Modeling somatic and dendritic spike mediated plasticity at the single neuron and network level. Nature communications. 8 [PubMed]

• Modeling dendritic spikes and plasticity (Bono and Clopath 2017) [Model]

Clopath C, Büsing L, Vasilaki E, Gerstner W. (2010). Connectivity reflects coding: a model of voltage-based STDP with homeostasis. Nature neuroscience. 13 [PubMed]

• Voltage-based STDP synapse (Clopath et al. 2010) [Model]

Clopath C, Pedrosa V. (2017). The role of neuromodulators in cortical plasticity. A computational perspective. Front. Synaptic Neurosci.. 8

• A simple model of neuromodulatory state-dependent synaptic plasticity (Pedrosa and Clopath, 2016) [Model]

Delgado JY, Gómez-González JF, Desai NS. (2010). Pyramidal neuron conductance state gates spike-timing-dependent plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

• Pyramidal neuron conductances state and STDP (Delgado et al. 2010) [Model]

Ebner C, Clopath C, Jedlicka P, Cuntz H. (2019). Unifying Long-Term Plasticity Rules for Excitatory Synapses by Modeling Dendrites of Cortical Pyramidal Neurons. Cell reports. 29 [PubMed]

• Four-pathway phenomenological synaptic plasticity model (Ebner et al. 2019) [Model]

Gerkin RC, Lau PM, Nauen DW, Wang YT, Bi GQ. (2007). Modular competition driven by NMDA receptor subtypes in spike-timing-dependent plasticity. Journal of neurophysiology. 97 [PubMed]

• STDP and NMDAR Subunits (Gerkin et al. 2007) [Model]

Gorodetski L et al. (2021). Endocannabinoids and Dopamine Balance Basal Ganglia Output. Frontiers in cellular neuroscience. 15 [PubMed]

• Information trans. through Entopeduncular nucleus modified by synaptic plasticity (Gorodetsky et al) [Model]

Graupner M, Brunel N. (2007). STDP in a bistable synapse model based on CaMKII and associated signaling pathways. PLoS computational biology. 3 [PubMed]

• CaMKII system exhibiting bistability with respect to calcium (Graupner and Brunel 2007) [Model]

Graupner M, Brunel N. (2012). Calcium-based plasticity model explains sensitivity of synaptic changes to spike pattern, rate, and dendritic location. Proceedings of the National Academy of Sciences of the United States of America. 109 [PubMed]

Legenstein R, Maass W. (2011). Branch-specific plasticity enables self-organization of nonlinear computation in single neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

Manninen T, Saudargiene A, Linne ML. (2020). Astrocyte-mediated spike-timing-dependent long-term depression modulates synaptic properties in the developing cortex. PLoS computational biology. 16 [PubMed]

• A synapse model for developing somatosensory cortex (Manninen et al 2020) [Model]

Mäki-Marttunen T, Iannella N, Edwards AG, Einevoll GT, Blackwell KT. (2020). A unified computational model for cortical post-synaptic plasticity. eLife. 9 [PubMed]

• Biochemically detailed model of LTP and LTD in a cortical spine (Maki-Marttunen et al 2020) [Model]

Müllner FE, Wierenga CJ, Bonhoeffer T. (2015). Precision of Inhibition: Dendritic Inhibition by Individual GABAergic Synapses on Hippocampal Pyramidal Cells Is Confined in Space and Time. Neuron. 87 [PubMed]

• CA1 pyramidal neuron: dendritic Ca2+ inhibition (Muellner et al. 2015) [Model]

Nevian T, Larkum ME, Polsky A, Schiller J. (2007). Properties of basal dendrites of layer 5 pyramidal neurons: a direct patch-clamp recording study. Nature neuroscience. 10 [PubMed]

• Dendritic Na+ spike initiation and backpropagation of APs in active dendrites (Nevian et al. 2007) [Model]

O'Donnell C, Nolan MF, van Rossum MC. (2011). Dendritic spine dynamics regulate the long-term stability of synaptic plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

• CA1 pyramidal neuron dendritic spine with plasticity (O`Donnell et al. 2011) [Model]

Yang GR, Murray JD, Wang XJ. (2016). A dendritic disinhibitory circuit mechanism for pathway-specific gating. Nature communications. 7 [PubMed]

• A dendritic disinhibitory circuit mechanism for pathway-specific gating (Yang et al. 2016) [Model]