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• Biophysical model for field potentials of networks of I&F neurons (beim Graben & Serafim 2013) [Model]

Bernard C, Jirsa VK, Woodman MM, Melozzi F. (2017). The Virtual Mouse Brain: A Computational Neuroinformatics Platform to Study Whole Mouse Brain Dynamics eNeuro.

• The Virtual Mouse Brain (TVMB) (Melozzi et al. 2017) [Model]

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• Sharpness of spike initiation in neurons explained by compartmentalization (Brette 2013) [Model]

Brette R, Goodman DF. (2011). Vectorized algorithms for spiking neural network simulation. Neural computation. 23 [PubMed]

• Vectorized algorithms for spiking neural network simulation (Brette and Goodman 2011) [Model]

Cattani A, Solinas S, Canuto C. (2016). A Hybrid Model for the Computationally-Efficient Simulation of the Cerebellar Granular Layer. Frontiers in computational neuroscience. 10 [PubMed]

Chavlis S, Petrantonakis PC, Poirazi P. (2017). Dendrites of dentate gyrus granule cells contribute to pattern separation by controlling sparsity. Hippocampus. 27 [PubMed]

• Dentate Gyrus model including Granule cells with dendritic compartments (Chavlis et al 2017) [Model]

Danielson NB et al. (2017). In Vivo Imaging of Dentate Gyrus Mossy Cells in Behaving Mice. Neuron. 93 [PubMed]

• In vivo imaging of dentate gyrus mossy cells in behaving mice (Danielson et al 2017) [Model]

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• Gamma-beta alternation in the olfactory bulb (David, Fourcaud-Trocmé et al., 2015) [Model]

Evans BD, Jarvis S, Schultz SR, Nikolic K. (2016). PyRhO: A Multiscale Optogenetics Simulation Platform. Frontiers in neuroinformatics. 10 [PubMed]

• PyRhO: A multiscale optogenetics simulation platform (Evans et al 2016) [Model]

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• eLIF and mAdExp: energy-based integrate-and-fire neurons (Fardet and Levina 2020) [Model]

Ferguson KA et al. (2015). Network models provide insights into how oriens-lacunosum-moleculare and bistratified cell interactions influence the power of local hippocampal CA1 theta oscillations. Frontiers in systems neuroscience. 9 [PubMed]

• CA1 SOM+ (OLM) hippocampal interneuron (Ferguson et al. 2015) [Model]

Ferguson KA, Huh CY, Amilhon B, Williams S, Skinner FK. (2013). Experimentally constrained CA1 fast-firing parvalbumin-positive interneuron network models exhibit sharp transitions into coherent high frequency rhythms. Frontiers in computational neuroscience. 7 [PubMed]

• CA1 PV+ fast-firing hippocampal interneuron (Ferguson et al. 2013) [Model]

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• Mean-field systems and small scale neural networks (Ferguson et al. 2015) [Model]
• CA1 pyramidal neuron network model (Ferguson et al 2015) [Model]

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• Cortical oscillations and the basal ganglia (Fountas & Shanahan 2017) [Model]

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• Software (called Optimizer) for fitting neuronal models (Friedrich et al. 2014) [Model]

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• Spike-Timing-Based Computation in Sound Localization (Goodman and Brette 2010) [Model]

Goodman DFM, Brette R. (2013). Brian simulator Scholarpedia. 8(1)

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• Neural Interactome: interactive simulation of a neuronal system (Kim et al 2019) [Model]

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• Late emergence of the whisker direction selectivity map in rat barrel cortex (Kremer et al. 2011) [Model]

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• Parallelizing large networks in NEURON (Lytton et al. 2016) [Model]

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• Fully-Asynchronous Cache-Efficient Simulation of Detailed Neural Networks (Magalhaes et al 2019) [Model]

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• COREM: configurable retina simulator (Martínez-Cañada et al., 2016) [Model]

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• STDP and oscillations produce phase-locking (Muller et al. 2011) [Model]

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• Excitation Properties of Computational Models of Unmyelinated Peripheral Axons (Pelot et al., 2021) [Model]

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• MDD: the role of glutamate dysfunction on Cingulo-Frontal NN dynamics (Ramirez-Mahaluf et al 2017) [Model]

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• Efficient simulation environment for modeling large-scale cortical processing (Richert et al. 2011) [Model]

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• Democratic population decisions result in robust policy-gradient learning (Richmond et al. 2011) [Model]

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• Sensitivity of noisy neurons to coincident inputs (Rossant et al. 2011) [Model]

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• NeuroMatic: software for acquisition, analysis and simulation of e-phys data (Rothman & Silver 2018) [Model]

Sherfey JS et al. (2018). DynaSim: A MATLAB Toolbox for Neural Modeling and Simulation. Frontiers in neuroinformatics. 12 [PubMed]

• DynaSim: a MATLAB toolbox for neural modeling and simulation (Sherfey et al 2018) [Model]

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• A full-scale cortical microcircuit spiking network model (Shimoura et al 2018) [Model]

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• Spontaneous weakly correlated excitation and inhibition (Tan et al. 2013) [Model]

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• Brain networks simulators - a comparative study (Tikidji-Hamburyan et al 2017) [Model]

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• Robust modulation of integrate-and-fire models (Van Pottelbergh et al 2018) [Model]

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• Hierarchical network model of perceptual decision making (Wimmer et al 2015) [Model]

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• Mesoscopic dynamics from AdEx recurrent networks (Zerlaut et al JCNS 2018) [Model]
• Mesoscopic dynamics from AdEx recurrent networks (Zerlaut et al JCNS 2018) (PyNN) [Model]