Anwar H et al. (2014). Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Frontiers in cellular neuroscience. 8 [PubMed]

• Calcium dynamics depend on dendritic diameters (Anwar et al. 2014) [Model]

Atherton LA, Prince LY, Tsaneva-Atanasova K. (2016). Bifurcation analysis of a two-compartment hippocampal pyramidal cell model. Journal of computational neuroscience. 41 [PubMed]

• Fully continuous Pinsky-Rinzel model for bifurcation analysis (Atherton et al. 2016) [Model]

Avella Gonzalez OJ, Mansvelder HD, van Pelt J, van Ooyen A. (2015). H-Channels Affect Frequency, Power and Amplitude Fluctuations of Neuronal Network Oscillations. Frontiers in computational neuroscience. 9 [PubMed]

• H-currents effect on the fluctuation of gamma/beta oscillations (Avella-Gonzalez et al., 2015) [Model]

Berzhanskaya J, Chernyy N, Gluckman BJ, Schiff SJ, Ascoli GA. (2013). Modulation of hippocampal rhythms by subthreshold electric fields and network topology. Journal of computational neuroscience. 34 [PubMed]

• Modulation of hippocampal rhythms by electric fields and network topology (Berzhanskaya et al. 2013) [Model]

Bock T, Negrean A, Siegelbaum SA. (2022). Somatic depolarization enhances hippocampal CA1 dendritic spike propagation and distal input-driven synaptic plasticity The Journal of neuroscience : the official journal of the Society for Neuroscience. 42 [PubMed]

• Depolarization Enhacement of Dendritic Spike Propagation (Bock et al 2022) [Model]

Burrell BD, Crisp KM. (2008). Serotonergic modulation of afterhyperpolarization in a neuron that contributes to learning in the leech. Journal of neurophysiology. 99 [PubMed]

• Leech S Cell: Modulation of Excitability by Serotonin (Burrell and Crisp 2008) [Model]

Chambers JD, Bornstein JC, Gwynne RM, Koussoulas K, Thomas EA. (2014). A detailed, conductance-based computer model of intrinsic sensory neurons of the gastrointestinal tract. American journal of physiology. Gastrointestinal and liver physiology. 307 [PubMed]

• Intrinsic sensory neurons of the gut (Chambers et al. 2014) [Model]

Day M et al. (2005). Dendritic excitability of mouse frontal cortex pyramidal neurons is shaped by the interaction among HCN, Kir2, and Kleak channels. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Destexhe A, Sejnowski TJ. (2003). Interactions between membrane conductances underlying thalamocortical slow-wave oscillations. Physiological reviews. 83 [PubMed]

Doiron B, Longtin A, Turner RW, Maler L. (2001). Model of gamma frequency burst discharge generated by conditional backpropagation. Journal of neurophysiology. 86 [PubMed]

Doiron B, Oswald AM, Maler L. (2007). Interval coding. II. Dendrite-dependent mechanisms. Journal of neurophysiology. 97 [PubMed]

Durstewitz D, Gabriel T. (2007). Dynamical basis of irregular spiking in NMDA-driven prefrontal cortex neurons. Cerebral cortex (New York, N.Y. : 1991). 17 [PubMed]

• Irregular spiking in NMDA-driven prefrontal cortex neurons (Durstewitz and Gabriel 2006) [Model]

Fernandez FR, Mehaffey WH, Turner RW. (2005). Dendritic Na+ current inactivation can increase cell excitability by delaying a somatic depolarizing afterpotential. Journal of neurophysiology. 94 [PubMed]

• Dendritic Na inactivation drives a decrease in ISI (Fernandez et al 2005) [Model]

Gasparini S, Migliore M, Magee JC. (2004). On the initiation and propagation of dendritic spikes in CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

• CA1 pyramidal neuron: dendritic spike initiation (Gasparini et al 2004) [Model]

Golomb D, Yue C, Yaari Y. (2006). Contribution of persistent Na+ current and M-type K+ current to somatic bursting in CA1 pyramidal cells: combined experimental and modeling study. Journal of neurophysiology. 96 [PubMed]

• CA1 pyramidal cell: I_NaP and I_M contributions to somatic bursting (Golomb et al 2006) [Model]

Hsu CL, Zhao X, Milstein AD, Spruston N. (2018). Persistent sodium current mediates the steep voltage dependence of spatial coding in hippocampal pyramidal neurons Neuron. 99

• CA1 pyramidal neuron: Persistent Na current mediates steep synaptic amplification (Hsu et al 2018) [Model]

Häusser M, Spruston N, Stuart GJ. (2000). Diversity and dynamics of dendritic signaling. Science (New York, N.Y.). 290 [PubMed]

Inoue M, Hashimoto Y, Kudo Y, Miyakawa H. (2001). Dendritic attenuation of synaptic potentials in the CA1 region of rat hippocampal slices detected with an optical method. The European journal of neuroscience. 13 [PubMed]

Jaffe DB, Brenner R. (2018). A computational model for how the fast afterhyperpolarization paradoxically increases gain in regularly firing neurons. Journal of neurophysiology. 119 [PubMed]

• Paradoxical effect of fAHP amplitude on gain in dentate gyrus granule cells (Jaffe & Brenner 2018) [Model]

Kim Y, Hsu CL, Cembrowski MS, Mensh BD, Spruston N. (2015). Dendritic sodium spikes are required for long-term potentiation at distal synapses on hippocampal pyramidal neurons. eLife. 4 [PubMed]

• CA1 pyramidal neuron: Dendritic Na+ spikes are required for LTP at distal synapses (Kim et al 2015) [Model]

Magee JC, Cook EP. (2000). Somatic EPSP amplitude is independent of synapse location in hippocampal pyramidal neurons. Nature neuroscience. 3 [PubMed]

• CA1 pyramidal neuron: Synaptic Scaling (Magee, Cook 2000) [Model]

Mehaffey WH, Doiron B, Maler L, Turner RW. (2005). Deterministic multiplicative gain control with active dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Migliore M, Ferrante M, Ascoli GA. (2005). Signal propagation in oblique dendrites of CA1 pyramidal cells. Journal of neurophysiology. 94 [PubMed]

• CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005) [Model]

Neumaier F, Alpdogan S, Hescheler J, Schneider T. (2020). Zn2+-induced changes in Cav2.3 channel function: An electrophysiological and modeling study The Journal of general physiology. 152 [PubMed]

• A Markov model of human Cav2.3 channels and their modulation by Zn2+ (Neumaier et al 2020) [Model]

Prescott SA, De Koninck Y. (2005). Integration time in a subset of spinal lamina I neurons is lengthened by sodium and calcium currents acting synergistically to prolong subthreshold depolarization. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

• Tonic neuron in spinal lamina I: prolongation of subthreshold depol. (Prescott and De Koninck 2005) [Model]

Steephen JE, Manchanda R. (2009). Differences in biophysical properties of nucleus accumbens medium spiny neurons emerging from inactivation of inward rectifying potassium currents. Journal of computational neuroscience. 27 [PubMed]

• Effects of KIR current inactivation in NAc Medium Spiny Neurons (Steephen and Manchanda 2009) [Model]

Wilmes KA, Sprekeler H, Schreiber S. (2016). Inhibition as a Binary Switch for Excitatory Plasticity in Pyramidal Neurons. PLoS computational biology. 12 [PubMed]

• Inhibition of bAPs and Ca2+ spikes in a multi-compartment pyramidal neuron model (Wilmes et al 2016) [Model]

Zachariou M, Alexander SP, Coombes S, Christodoulou C. (2013). A biophysical model of endocannabinoid-mediated short term depression in hippocampal inhibition. PloS one. 8 [PubMed]

Zang Y, Marder E. (2023). Neuronal morphology enhances robustness to perturbations of channel densities Proceedings of the National Academy of Sciences of the United States of America. 120 [PubMed]

• LP neuron model database (Zang and Marder 2023) [Model]