Biophysical and phenomenological models of spike-timing dependent plasticity (Badoual et al. 2006)


Badoual M et al. (2006). Biophysical and phenomenological models of multiple spike interactions in spike-timing dependent plasticity. International journal of neural systems. 16 [PubMed]

See more from authors: Badoual M · Zou Q · Davison AP · Rudolph M · Bal T · Frégnac Y · Destexhe A

References and models cited by this paper

Allbritton NL, Meyer T, Stryer L. (1992). Range of messenger action of calcium ion and inositol 1,4,5-trisphosphate. Science (New York, N.Y.). 258 [PubMed]

Artola A, Bröcher S, Singer W. (1990). Different voltage-dependent thresholds for inducing long-term depression and long-term potentiation in slices of rat visual cortex. Nature. 347 [PubMed]

Artola A, Singer W. (1993). Long-term depression of excitatory synaptic transmission and its relationship to long-term potentiation. Trends in neurosciences. 16 [PubMed]

Bear MF. (1995). Mechanism for a sliding synaptic modification threshold. Neuron. 15 [PubMed]

Bear MF, Cooper LN, Ebner FF. (1987). A physiological basis for a theory of synapse modification. Science (New York, N.Y.). 237 [PubMed]

Bell CC, Han VZ, Sugawara Y, Grant K. (1997). Synaptic plasticity in a cerebellum-like structure depends on temporal order. Nature. 387 [PubMed]

Bi GQ, Poo MM. (1998). Synaptic modifications in cultured hippocampal neurons: dependence on spike timing, synaptic strength, and postsynaptic cell type. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Bienenstock EL, Cooper LN, Munro PW. (1982). Theory for the development of neuron selectivity: orientation specificity and binocular interaction in visual cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 2 [PubMed]

Boettiger CA, Doupe AJ. (2001). Developmentally restricted synaptic plasticity in a songbird nucleus required for song learning. Neuron. 31 [PubMed]

Bröcher S, Artola A, Singer W. (1992). Intracellular injection of Ca2+ chelators blocks induction of long-term depression in rat visual cortex. Proceedings of the National Academy of Sciences of the United States of America. 89 [PubMed]

Carmignoto G, Vicini S. (1992). Activity-dependent decrease in NMDA receptor responses during development of the visual cortex. Science (New York, N.Y.). 258 [PubMed]

Castellani GC, Quinlan EM, Cooper LN, Shouval HZ. (2001). A biophysical model of bidirectional synaptic plasticity: dependence on AMPA and NMDA receptors. Proceedings of the National Academy of Sciences of the United States of America. 98 [PubMed]

Colbran RJ. (2004). Protein phosphatases and calcium/calmodulin-dependent protein kinase II-dependent synaptic plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

Cormier RJ, Greenwood AC, Connor JA. (2001). Bidirectional synaptic plasticity correlated with the magnitude of dendritic calcium transients above a threshold. Journal of neurophysiology. 85 [PubMed]

Cummings JA, Mulkey RM, Nicoll RA, Malenka RC. (1996). Ca2+ signaling requirements for long-term depression in the hippocampus. Neuron. 16 [PubMed]

D'Alcantara P, Schiffmann SN, Swillens S. (2003). Bidirectional synaptic plasticity as a consequence of interdependent Ca2+-controlled phosphorylation and dephosphorylation pathways. The European journal of neuroscience. 17 [PubMed]

Destexhe A, Babloyantz A, Sejnowski TJ. (1993). Ionic mechanisms for intrinsic slow oscillations in thalamic relay neurons. Biophysical journal. 65 [PubMed]

Dudek SM, Bear MF. (1992). Homosynaptic long-term depression in area CA1 of hippocampus and effects of N-methyl-D-aspartate receptor blockade. Proceedings of the National Academy of Sciences of the United States of America. 89 [PubMed]

Eggermont JJ. (1991). Neuronal pair and triplet interactions in the auditory midbrain of the leopard frog. Journal of neurophysiology. 66 [PubMed]

Feldman DE. (2000). Timing-based LTP and LTD at vertical inputs to layer II/III pyramidal cells in rat barrel cortex. Neuron. 27 [PubMed]

Feldman DE, Shulz DE, Brasier DJ. (2004). Spike-timing dependent plasticity investigated using Whole-cell recordingin rat somatosensory cortex (S1) in vivo Soc Neurosci Abstr.

Feldmeyer D, Lübke J, Silver RA, Sakmann B. (2002). Synaptic connections between layer 4 spiny neurone-layer 2/3 pyramidal cell pairs in juvenile rat barrel cortex: physiology and anatomy of interlaminar signalling within a cortical column. The Journal of physiology. 538 [PubMed]

Fregnac Y. (2002). Hebbian synaptic plasticity The handbook of brain theory and neural networks.

Fregnac Y, Pananceau M, Rene A, Huguet N. (2003). An in vivo generalization of Hebbian plasticity rules in adult visual cortex to multiple pre-post synaptic activity correlatio Soc Neurosci Abstr. 29

Froemke RC, Dan Y. (2002). Spike-timing-dependent synaptic modification induced by natural spike trains. Nature. 416 [PubMed]

Frégnac Y, Shulz DE. (1999). Activity-dependent regulation of receptive field properties of cat area 17 by supervised Hebbian learning. Journal of neurobiology. 41 [PubMed]

Gold JI, Bear MF. (1994). A model of dendritic spine Ca2+ concentration exploring possible bases for a sliding synaptic modification threshold. Proceedings of the National Academy of Sciences of the United States of America. 91 [PubMed]

Goldman DE. (1943). POTENTIAL, IMPEDANCE, AND RECTIFICATION IN MEMBRANES. The Journal of general physiology. 27 [PubMed]

Gütig R, Aharonov R, Rotter S, Sompolinsky H. (2003). Learning input correlations through nonlinear temporally asymmetric Hebbian plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

HODGKIN AL, KATZ B. (1949). The effect of sodium ions on the electrical activity of giant axon of the squid. The Journal of physiology. 108 [PubMed]

Hanson PI, Schulman H. (1992). Neuronal Ca2+/calmodulin-dependent protein kinases. Annual review of biochemistry. 61 [PubMed]

Harris KM, Kater SB. (1994). Dendritic spines: cellular specializations imparting both stability and flexibility to synaptic function. Annual review of neuroscience. 17 [PubMed]

Hines ML, Carnevale NT. (1997). The NEURON simulation environment. Neural computation. 9 [PubMed]

Holthoff K, Tsay D, Yuste R. (2002). Calcium dynamics of spines depend on their dendritic location. Neuron. 33 [PubMed]

Izhikevich EM, Desai NS. (2003). Relating STDP to BCM. Neural computation. 15 [PubMed]

Jahr CE, Stevens CF. (1990). Voltage dependence of NMDA-activated macroscopic conductances predicted by single-channel kinetics. The Journal of neuroscience : the official journal of the Society for Neuroscience. 10 [PubMed]

Karmarkar UR, Buonomano DV. (2002). A model of spike-timing dependent plasticity: one or two coincidence detectors? Journal of neurophysiology. 88 [PubMed]

Kirkwood A, Bear MF. (1994). Homosynaptic long-term depression in the visual cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 14 [PubMed]

Levy WB, Desmond NL. (1985). The rules of elemental synaptic plasticity Synaptic Modification, Neuron Selectivity, and Nervous System Organization.

Levy WB, Steward O. (1983). Temporal contiguity requirements for long-term associative potentiation/depression in the hippocampus. Neuroscience. 8 [PubMed]

Lisman J. (1989). A mechanism for the Hebb and the anti-Hebb processes underlying learning and memory. Proceedings of the National Academy of Sciences of the United States of America. 86 [PubMed]

Lisman JE. (1985). A mechanism for memory storage insensitive to molecular turnover: a bistable autophosphorylating kinase. Proceedings of the National Academy of Sciences of the United States of America. 82 [PubMed]

Liu L et al. (2004). Role of NMDA receptor subtypes in governing the direction of hippocampal synaptic plasticity. Science (New York, N.Y.). 304 [PubMed]

Lynch G, Larson J, Kelso S, Barrionuevo G, Schottler F. (1983). Intracellular injections of EGTA block induction of hippocampal long-term potentiation. Nature. 305 [PubMed]

Magee JC, Johnston D. (1997). A synaptically controlled, associative signal for Hebbian plasticity in hippocampal neurons. Science (New York, N.Y.). 275 [PubMed]

Mainen ZF, Sejnowski TJ. (1996). Influence of dendritic structure on firing pattern in model neocortical neurons. Nature. 382 [PubMed]

Malenka RC, Kauer JA, Zucker RS, Nicoll RA. (1988). Postsynaptic calcium is sufficient for potentiation of hippocampal synaptic transmission. Science (New York, N.Y.). 242 [PubMed]

Markram H, Helm PJ, Sakmann B. (1995). Dendritic calcium transients evoked by single back-propagating action potentials in rat neocortical pyramidal neurons. The Journal of physiology. 485 ( Pt 1) [PubMed]

Markram H, Lübke J, Frotscher M, Sakmann B. (1997). Regulation of synaptic efficacy by coincidence of postsynaptic APs and EPSPs. Science (New York, N.Y.). 275 [PubMed]

Massey PV et al. (2004). Differential roles of NR2A and NR2B-containing NMDA receptors in cortical long-term potentiation and long-term depression. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

Miller SG, Kennedy MB. (1986). Regulation of brain type II Ca2+/calmodulin-dependent protein kinase by autophosphorylation: a Ca2+-triggered molecular switch. Cell. 44 [PubMed]

Mulkey RM, Malenka RC. (1992). Mechanisms underlying induction of homosynaptic long-term depression in area CA1 of the hippocampus. Neuron. 9 [PubMed]

Nase G, Weishaupt J, Stern P, Singer W, Monyer H. (1999). Genetic and epigenetic regulation of NMDA receptor expression in the rat visual cortex. The European journal of neuroscience. 11 [PubMed]

Neveu D, Zucker RS. (1996). Postsynaptic levels of [Ca2+]i needed to trigger LTD and LTP. Neuron. 16 [PubMed]

Nishiyama M, Hong K, Mikoshiba K, Poo MM, Kato K. (2000). Calcium stores regulate the polarity and input specificity of synaptic modification. Nature. 408 [PubMed]

Oliet SH, Malenka RC, Nicoll RA. (1997). Two distinct forms of long-term depression coexist in CA1 hippocampal pyramidal cells. Neuron. 18 [PubMed]

Quinlan EM, Olstein DH, Bear MF. (1999). Bidirectional, experience-dependent regulation of N-methyl-D-aspartate receptor subunit composition in the rat visual cortex during postnatal development. Proceedings of the National Academy of Sciences of the United States of America. 96 [PubMed]

Rubin JE, Gerkin RC, Bi GQ, Chow CC. (2005). Calcium time course as a signal for spike-timing-dependent plasticity. Journal of neurophysiology. 93 [PubMed]

Sabatini BL, Oertner TG, Svoboda K. (2002). The life cycle of Ca(2+) ions in dendritic spines. Neuron. 33 [PubMed]

Sabatini BL, Svoboda K. (2000). Analysis of calcium channels in single spines using optical fluctuation analysis. Nature. 408 [PubMed]

Sejnowski TJ, Destexhe A, Mainen Z. (1994). An efficient method for computing synaptic conductances based on a kinetic model of receptor binding Neural Comput. 6

Sejnowski TJ, Destexhe A, Mainen ZF. (1998). Kinetic models of synaptic transmission Methods In Neuronal Modeling.

Senn W, Markram H, Tsodyks M. (2001). An algorithm for modifying neurotransmitter release probability based on pre- and postsynaptic spike timing. Neural computation. 13 [PubMed]

Shouval HZ, Bear MF, Cooper LN. (2002). A unified model of NMDA receptor-dependent bidirectional synaptic plasticity. Proceedings of the National Academy of Sciences of the United States of America. 99 [PubMed]

Shouval HZ, Kalantzis G. (2005). Stochastic properties of synaptic transmission affect the shape of spike time-dependent plasticity curves. Journal of neurophysiology. 93 [PubMed]

Sjöström PJ, Turrigiano GG, Nelson SB. (2001). Rate, timing, and cooperativity jointly determine cortical synaptic plasticity. Neuron. 32 [PubMed]

Song S, Miller KD, Abbott LF. (2000). Competitive Hebbian learning through spike-timing-dependent synaptic plasticity. Nature neuroscience. 3 [PubMed]

Stuart GJ, Häusser M. (2001). Dendritic coincidence detection of EPSPs and action potentials. Nature neuroscience. 4 [PubMed]

Wang HX, Gerkin RC, Nauen DW, Bi GQ. (2005). Coactivation and timing-dependent integration of synaptic potentiation and depression. Nature neuroscience. 8 [PubMed]

Yang SN, Tang YG, Zucker RS. (1999). Selective induction of LTP and LTD by postsynaptic [Ca2+]i elevation. Journal of neurophysiology. 81 [PubMed]

Yasuda H, Tsumoto T. (1996). Long-term depression in rat visual cortex is associated with a lower rise of postsynaptic calcium than long-term potentiation. Neuroscience research. 24 [PubMed]

Yuste R, Denk W. (1995). Dendritic spines as basic functional units of neuronal integration. Nature. 375 [PubMed]

Zhabotinsky AM. (2000). Bistability in the Ca(2+)/calmodulin-dependent protein kinase-phosphatase system. Biophysical journal. 79 [PubMed]

Zucker RS. (1999). Calcium- and activity-dependent synaptic plasticity. Current opinion in neurobiology. 9 [PubMed]

van Rossum MC, Bi GQ, Turrigiano GG. (2000). Stable Hebbian learning from spike timing-dependent plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]

References and models that cite this paper

Carnevale NT, Morse TM. (1996). Research reports that have used NEURON Web published citations at the NEURON website.

Delgado JY, Gómez-González JF, Desai NS. (2010). Pyramidal neuron conductance state gates spike-timing-dependent plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

Manninen T, Hituri K, Kotaleski JH, Blackwell KT, Linne ML. (2010). Postsynaptic signal transduction models for long-term potentiation and depression. Frontiers in computational neuroscience. 4 [PubMed]

Manninen T, Saudargiene A, Linne ML. (2020). Astrocyte-mediated spike-timing-dependent long-term depression modulates synaptic properties in the developing cortex. PLoS computational biology. 16 [PubMed]

Mäki-Marttunen T, Iannella N, Edwards AG, Einevoll GT, Blackwell KT. (2020). A unified computational model for cortical post-synaptic plasticity. eLife. 9 [PubMed]

Saudargiene A, Cobb S, Graham BP. (2015). A computational study on plasticity during theta cycles at Schaffer collateral synapses on CA1 pyramidal cells in the hippocampus. Hippocampus. 25 [PubMed]

Sterratt DC, Graham B, Gillies A, Willshaw D. (2011). Principles of Computational Modelling in Neuroscience, Cambridge University Press.

This website requires cookies and limited processing of your personal data in order to function. By continuing to browse or otherwise use this site, you are agreeing to this use. See our Privacy policy and how to cite and terms of use.