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• CA1 pyramidal neuron: calculation of MRI signals (Cassara et al. 2008) [Model]

Cassarà AM, Maraviglia B. (2008). Microscopic investigation of the resonant mechanism for the implementation of nc-MRI at ultra-low field MRI. NeuroImage. 41 [PubMed]

• CA1 pyramidal neuron: calculation of MRI signals (Cassara et al. 2008) [Model]

Cattani A, Solinas S, Canuto C. (2016). A Hybrid Model for the Computationally-Efficient Simulation of the Cerebellar Granular Layer. Frontiers in computational neuroscience. 10 [PubMed]

Cavarretta F, Carnevale NT, Tegolo D, Migliore M. (2014). Effects of low frequency electric fields on synaptic integration in hippocampal CA1 pyramidal neurons: implications for power line emissions. Frontiers in cellular neuroscience. 8 [PubMed]

• CA1 pyramidal neurons: effect of external electric field from power lines (Cavarretta et al. 2014) [Model]

De Schutter E. (2014). The dangers of plug-and-play simulation using shared models. Neuroinformatics. 12 [PubMed]

Donohue DE, Ascoli GA. (2008). A comparative computer simulation of dendritic morphology. PLoS computational biology. 4 [PubMed]

• A comparative computer simulation of dendritic morphology (Donohue and Ascoli 2008) [Model]

Ferrante M, Blackwell KT, Migliore M, Ascoli GA. (2008). Computational models of neuronal biophysics and the characterization of potential neuropharmacological targets. Current medicinal chemistry. 15 [PubMed]

• Computational neuropharmacology of CA1 pyramidal neuron (Ferrante et al. 2008) [Model]

Grein S, Stepniewski M, Reiter S, Knodel MM, Queisser G. (2014). 1D-3D hybrid modeling-from multi-compartment models to full resolution models in space and time. Frontiers in neuroinformatics. 8 [PubMed]

Gunn BG et al. (2017). The Endogenous Stress Hormone CRH Modulates Excitatory Transmission and Network Physiology in Hippocampus. Cerebral cortex (New York, N.Y. : 1991). 27 [PubMed]

• CRH modulates excitatory transmission and network physiology in hippocampus (Gunn et al. 2017) [Model]

Hines ML, Morse T, Migliore M, Carnevale NT, Shepherd GM. (2004). ModelDB: A Database to Support Computational Neuroscience. Journal of computational neuroscience. 17 [PubMed]

Le Franc Y, Le Masson G. (2010). Multiple firing patterns in deep dorsal horn neurons of the spinal cord: computational analysis of mechanisms and functional implications. Journal of neurophysiology. 104 [PubMed]

Manis PB, Campagnola L. (2018). A biophysical modelling platform of the cochlear nucleus and other auditory circuits: From channels to networks. Hearing research. 360 [PubMed]

• Modelling platform of the cochlear nucleus and other auditory circuits (Manis & Compagnola 2018) [Model]

Manninen T, Havela R, Linne M-L. (2017). Reproducibility and comparability of computational models for astrocyte calcium excitability Front. Neuroinform..

• Ca2+ oscillations in single astrocytes (Lavrentovich and Hemkin 2008) (python) (Manninen et al 2017) [Model]
• Glutamate-evoked Ca2+ oscillations in single astrocytes (De Pitta et al. 2009) (Manninen et al 2017) [Model]
• Spontaneous calcium oscillations in single astrocytes (Riera et al. 2011) (Manninen et al 2017) [Model]
• Glutamate-evoked Ca2+ oscillations in single astrocytes (Modified from Dupont et al. 2011) [Model]
• Reproducibility and comparability of models for astrocyte Ca2+ excitability (Manninen et al 2017) [Model]

Manninen T, Hituri K, Kotaleski JH, Blackwell KT, Linne ML. (2010). Postsynaptic signal transduction models for long-term potentiation and depression. Frontiers in computational neuroscience. 4 [PubMed]

McDougal RA, Bulanova AS, Lytton WW. (2016). Reproducibility in Computational Neuroscience Models and Simulations. IEEE transactions on bio-medical engineering. 63 [PubMed]

McDougal RA, Morse TM, Hines ML, Shepherd GM. (2015). ModelView for ModelDB: Online Presentation of Model Structure. Neuroinformatics. 13 [PubMed]

• ModelView: online structural analysis of computational models (McDougal et al. 2015) [Model]

Miceli F et al. (2013). Genotype-phenotype correlations in neonatal epilepsies caused by mutations in the voltage sensor of K(v)7.2 potassium channel subunits. Proceedings of the National Academy of Sciences of the United States of America. 110 [PubMed]

• CA1 pyramidal neuron: effects of R213Q and R312W Kv7.2 mutations (Miceli et al. 2013) [Model]

Miceli F et al. (2009). Neutralization of a unique, negatively-charged residue in the voltage sensor of K V 7.2 subunits in a sporadic case of benign familial neonatal seizures. Neurobiology of disease. 34 [PubMed]

• CA1 pyramidal neurons: effects of a Kv7.2 mutation (Miceli et al. 2009) [Model]

Migliore M, Ferrante M, Ascoli GA. (2005). Signal propagation in oblique dendrites of CA1 pyramidal cells. Journal of neurophysiology. 94 [PubMed]

• CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005) [Model]

Morse TM. (2008). ModelDB in computational neuroscience education - a research tool as interactive educational media. Brains, minds & media : journal of new media in neural and cognitive science and education. 3 [PubMed]

Neymotin SA et al. (2017). Optimizing computer models of corticospinal neurons to replicate in vitro dynamics. Journal of neurophysiology. 117 [PubMed]

• Computer models of corticospinal neurons replicate in vitro dynamics (Neymotin et al. 2017) [Model]

Parasuram H et al. (2016). Computational Modeling of Single Neuron Extracellular Electric Potentials and Network Local Field Potentials using LFPsim. Frontiers in computational neuroscience. 10 [PubMed]

• Modeling single neuron LFPs and extracellular potentials with LFPsim (Parasuram et al. 2016) [Model]

Schneider CJ, Cuntz H, Soltesz I. (2014). Linking macroscopic with microscopic neuroanatomy using synthetic neuronal populations. PLoS computational biology. 10 [PubMed]

• Generation of granule cell dendritic morphology (Schneider et al. 2014) [Model]

Shah MM, Migliore M, Brown DA. (2011). Differential effects of Kv7 (M-) channels on synaptic integration in distinct subcellular compartments of rat hippocampal pyramidal neurons. The Journal of physiology. 589 [PubMed]

• CA1 pyramidal neurons: effects of Kv7 (M-) channels on synaptic integration (Shah et al. 2011) [Model]

Shah MM, Migliore M, Valencia I, Cooper EC, Brown DA. (2008). Functional significance of axonal Kv7 channels in hippocampal pyramidal neurons. Proceedings of the National Academy of Sciences of the United States of America. 105 [PubMed]

• CA1 pyramidal neuron: functional significance of axonal Kv7 channels (Shah et al. 2008) [Model]

Stanley DA et al. (2013). Phase shift in the 24-hour rhythm of hippocampal EEG spiking activity in a rat model of temporal lobe epilepsy. Journal of neurophysiology. 110 [PubMed]

• Hippocampal CA3 network and circadian regulation (Stanley et al. 2013) [Model]

Varela JA, Wang J, Christianson JP, Maier SF, Cooper DC. (2012). Control over Stress, But Not Stress Per Se Increases Prefrontal Cortical Pyramidal Neuron Excitability The Journal of neuroscience : the official journal of the Society for Neuroscience. 32 [PubMed]