Almog M, Korngreen A. (2014). A Quantitative Description of Dendritic Conductances and Its Application to Dendritic Excitation in Layer 5 Pyramidal Neurons The Journal of neuroscience : the official journal of the Society for Neuroscience. 34 [PubMed]

• Ionic mechanisms of dendritic spikes (Almog and Korngreen 2014) [Model]

Arsiero M, Lüscher HR, Lundstrom BN, Giugliano M. (2007). The impact of input fluctuations on the frequency-current relationships of layer 5 pyramidal neurons in the rat medial prefrontal cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 27 [PubMed]

• Input Fluctuations effects on f-I curves (Arsiero et al. 2007) [Model]

Barlow BSM, Longtin A, Joós B. (2024). Impact on backpropagation of the spatial heterogeneity of sodium channel kinetics in the axon initial segment. PLoS computational biology. 20 [PubMed]

• Impact on backpropagation of the spatial heterogeneity of sodium channel kinetics in the axon initial segment (Barlow et al., 2024) [Model]

Behabadi BF, Mel BW. (2014). Mechanisms underlying subunit independence in pyramidal neuron dendrites. Proceedings of the National Academy of Sciences of the United States of America. 111 [PubMed]

• Mechanisms underlying subunit independence in pyramidal neuron dendrites (Behabadi and Mel 2014) [Model]

Doiron B, Noonan L, Lemon N, Turner RW. (2003). Persistent Na+ current modifies burst discharge by regulating conditional backpropagation of dendritic spikes. Journal of neurophysiology. 89 [PubMed]

Egger R et al. (2020). Cortical Output Is Gated by Horizontally Projecting Neurons in the Deep Layers Neuron. 105

• Sensory-evoked responses of L5 pyramidal tract neurons (Egger et al 2020) [Model]

Galloni AR, Laffere A, Rancz E. (2020). Apical length governs computational diversity of layer 5 pyramidal neurons. eLife. 9 [PubMed]

• Apical Length Governs Computational Diversity of Layer 5 Pyramidal Neurons (Galloni et al 2020) [Model]

Golding NL, Kath WL, Spruston N. (2001). Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites. Journal of neurophysiology. 86 [PubMed]

• Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites (Golding et al 2001) [Model]

Górski T et al. (2018). Dendritic sodium spikes endow neurons with inverse firing rate response to correlated synaptic activity. Journal of computational neuroscience. 45 [PubMed]

• Response to correlated synaptic input for HH/IF point neuron vs with dendrite (Górski et al 2018) [Model]

Hay E, Hill S, Schürmann F, Markram H, Segev I. (2011). Models of neocortical layer 5b pyramidal cells capturing a wide range of dendritic and perisomatic active properties. PLoS computational biology. 7 [PubMed]

• L5b PC model constrained for BAC firing and perisomatic current step firing (Hay et al., 2011) [Model]
• Layer V pyramidal cell model with reduced morphology (Mäki-Marttunen et al 2018) [Model]
• Cortical Layer 5b pyr. cell with [Na+]i mechanisms, from Hay et al 2011 (Zylbertal et al 2017) [Model]

Häusser M, Mel B. (2003). Dendrites: bug or feature? Current opinion in neurobiology. 13 [PubMed]

Häusser M, Spruston N, Stuart GJ. (2000). Diversity and dynamics of dendritic signaling. Science (New York, N.Y.). 290 [PubMed]

Iannella N, Tanaka S. (2006). Synaptic efficacy cluster formation across the dendrite via STDP. Neuroscience letters. 403 [PubMed]

Kampa BM, Stuart GJ. (2006). Calcium spikes in basal dendrites of layer 5 pyramidal neurons during action potential bursts. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

• Calcium spikes in basal dendrites (Kampa and Stuart 2006) [Model]

Karameh FN, Dahleh MA, Brown EN, Massaquoi SG. (2006). Modeling the contribution of lamina 5 neuronal and network dynamics to low frequency EEG phenomena. Biological cybernetics. 95 [PubMed]

Körding KP, König P. (2001). Supervised and unsupervised learning with two sites of synaptic integration. Journal of computational neuroscience. 11 [PubMed]

Larkum ME, Nevian T, Sandler M, Polsky A, Schiller J. (2009). Synaptic integration in tuft dendrites of layer 5 pyramidal neurons: a new unifying principle. Science (New York, N.Y.). 325 [PubMed]

• Synaptic integration in tuft dendrites of layer 5 pyramidal neurons (Larkum et al. 2009) [Model]

Letzkus JJ, Kampa BM, Stuart GJ. (2006). Learning rules for spike timing-dependent plasticity depend on dendritic synapse location. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

• STDP depends on dendritic synapse location (Letzkus et al. 2006) [Model]

Li X, Ascoli GA. (2006). Computational simulation of the input-output relationship in hippocampal pyramidal cells. Journal of computational neuroscience. 21 [PubMed]

• CA1 pyramidal neuron synaptic integration (Li and Ascoli 2006, 2008) [Model]

Mittmann W, Chadderton P, Häusser M. (2004). Neuronal microcircuits: frequency-dependent flow of inhibition. Current biology : CB. 14 [PubMed]

Murakami S, Okada Y. (2006). Contributions of principal neocortical neurons to magnetoencephalography and electroencephalography signals. The Journal of physiology. 575 [PubMed]

Nevian T, Larkum ME, Polsky A, Schiller J. (2007). Properties of basal dendrites of layer 5 pyramidal neurons: a direct patch-clamp recording study. Nature neuroscience. 10 [PubMed]

• Dendritic Na+ spike initiation and backpropagation of APs in active dendrites (Nevian et al. 2007) [Model]

Pashut T et al. (2011). Mechanisms of magnetic stimulation of central nervous system neurons. PLoS computational biology. 7 [PubMed]

• Mechanisms of magnetic stimulation of central nervous system neurons (Pashut et al. 2011) [Model]

Rhodes PA, Llinás RR. (2001). Apical tuft input efficacy in layer 5 pyramidal cells from rat visual cortex. The Journal of physiology. 536 [PubMed]

Rudolph M, Destexhe A. (2003). A fast-conducting, stochastic integrative mode for neocortical neurons in vivo. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Schaefer AT et al. (2007). Dendritic voltage-gated K+ conductance gradient in pyramidal neurones of neocortical layer 5B from rats. The Journal of physiology. 579 [PubMed]

• Correcting space clamp in dendrites (Schaefer et al. 2003 and 2007) [Model]

Schaefer AT, Larkum ME, Sakmann B, Roth A. (2003). Coincidence detection in pyramidal neurons is tuned by their dendritic branching pattern. Journal of neurophysiology. 89 [PubMed]

• Pyramidal neuron coincidence detection tuned by dendritic branching pattern (Schaefer et al 2003) [Model]

Shai AS, Anastassiou CA, Larkum ME, Koch C. (2015). Physiology of layer 5 pyramidal neurons in mouse primary visual cortex: coincidence detection through bursting. PLoS computational biology. 11 [PubMed]

• Layer 5 Pyramidal Neuron (Shai et al., 2015) [Model]

Shu Y, Duque A, Yu Y, Haider B, McCormick DA. (2007). Properties of action-potential initiation in neocortical pyramidal cells: evidence from whole cell axon recordings. Journal of neurophysiology. 97 [PubMed]

• Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007) [Model]

Vetter P, Roth A, Häusser M. (2001). Propagation of action potentials in dendrites depends on dendritic morphology. Journal of neurophysiology. 85 [PubMed]

• Dendritica (Vetter et al 2001) [Model]

Wilmes KA, Sprekeler H, Schreiber S. (2016). Inhibition as a Binary Switch for Excitatory Plasticity in Pyramidal Neurons. PLoS computational biology. 12 [PubMed]

• Inhibition of bAPs and Ca2+ spikes in a multi-compartment pyramidal neuron model (Wilmes et al 2016) [Model]