Aberra AS, Peterchev AV, Grill WM. (2018). Biophysically realistic neuron models for simulation of cortical stimulation. Journal of neural engineering. 15 [PubMed]

• Biophysically realistic neuron models for simulation of cortical stimulation (Aberra et al. 2018) [Model]

Anwar H et al. (2014). Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Frontiers in cellular neuroscience. 8 [PubMed]

• Calcium dynamics depend on dendritic diameters (Anwar et al. 2014) [Model]

Bono J, Clopath C. (2017). Modeling somatic and dendritic spike mediated plasticity at the single neuron and network level. Nature communications. 8 [PubMed]

• Modeling dendritic spikes and plasticity (Bono and Clopath 2017) [Model]

Dan O, Hopp E, Borst A, Segev I. (2018). Non-uniform weighting of local motion inputs underlies dendritic computation in the fly visual system. Scientific reports. 8 [PubMed]

• Vertical system (VS) fly cells with biophysics (Dan et al 2018) [Model]

Deitcher Y et al. (2017). Comprehensive Morpho-Electrotonic Analysis Shows 2 Distinct Classes of L2 and L3 Pyramidal Neurons in Human Temporal Cortex. Cerebral cortex (New York, N.Y. : 1991). 27 [PubMed]

• 2 Distinct Classes of L2 and L3 Pyramidal Neurons in Human Temporal Cortex (Deitcher et al 2017) [Model]

Doron M, Chindemi G, Muller E, Markram H, Segev I. (2017). Timed Synaptic Inhibition Shapes NMDA Spikes, Influencing Local Dendritic Processing and Global I/O Properties of Cortical Neurons. Cell reports. 21 [PubMed]

• Shaping NMDA spikes by timed synaptic inhibition on L5PC (Doron et al. 2017) [Model]

Du K et al. (2017). Cell-type-specific inhibition of the dendritic plateau potential in striatal spiny projection neurons. Proceedings of the National Academy of Sciences of the United States of America. 114 [PubMed]

• Specific inhibition of dendritic plateau potential in striatal projection neurons (Du et al 2017) [Model]

Ebner C, Clopath C, Jedlicka P, Cuntz H. (2019). Unifying Long-Term Plasticity Rules for Excitatory Synapses by Modeling Dendrites of Cortical Pyramidal Neurons. Cell reports. 29 [PubMed]

• Four-pathway phenomenological synaptic plasticity model (Ebner et al. 2019) [Model]

Eyal G et al. (2018). Human Cortical Pyramidal Neurons: From Spines to Spikes via Models. Frontiers in cellular neuroscience. 12 [PubMed]

• Comprehensive models of human cortical pyramidal neurons (Eyal et al 2018) [Model]

Hawkins J, Ahmad S. (2016). Why Neurons Have Thousands of Synapses, a Theory of Sequence Memory in Neocortex. Frontiers in neural circuits. 10 [PubMed]

• Theory of sequence memory in neocortex (Hawkins & Ahmad 2016) [Model]

Hsu CL, Zhao X, Milstein AD, Spruston N. (2018). Persistent sodium current mediates the steep voltage dependence of spatial coding in hippocampal pyramidal neurons Neuron. 99

• CA1 pyramidal neuron: Persistent Na current mediates steep synaptic amplification (Hsu et al 2018) [Model]

Kim Y, Hsu CL, Cembrowski MS, Mensh BD, Spruston N. (2015). Dendritic sodium spikes are required for long-term potentiation at distal synapses on hippocampal pyramidal neurons. eLife. 4 [PubMed]

• CA1 pyramidal neuron: Dendritic Na+ spikes are required for LTP at distal synapses (Kim et al 2015) [Model]

Muller SZ, Abbott LF, Sawtell NB. (2023). A Mechanism for Differential Control of Axonal and Dendritic Spiking Underlying Learning in a Cerebellum-like Circuit Curr Biol. [PubMed]

• ELL Medium Ganglion Cell (Mormyrid fish) (Muller et al, 2023) [Model]

Obi-Nagata K et al. (2023). Distorted neurocomputation by a small number of extra-large spines in psychiatric disorders Science Advances. 9(23) [PubMed]

• Neuronal computation evoked by extra-large spines (Obi-Nagata et al., 2023) [Model]

Papoutsi A, Sidiropoulou K, Poirazi P. (2014). Dendritic nonlinearities reduce network size requirements and mediate ON and OFF states of persistent activity in a PFC microcircuit model. PLoS computational biology. 10 [PubMed]

• L5 PFC microcircuit used to study persistent activity (Papoutsi et al. 2014, 2013) [Model]

Park J et al. (2019). Contribution of apical and basal dendrites to orientation encoding in mouse V1 L2/3 pyramidal neurons Nature Communications. 10

• Orientation preference in L23 V1 pyramidal neurons (Park et al 2019) [Model]

Poleg-Polsky A. (2015). Effects of Neural Morphology and Input Distribution on Synaptic Processing by Global and Focal NMDA-Spikes. PloS one. 10 [PubMed]

• Effects of neural morphology on global and focal NMDA-spikes (Poleg-Polsky 2015) [Model]

Poleg-Polsky A. (2019). Dendritic spikes expand the range of well-tolerated population noise structures. The Journal of neuroscience : the official journal of the Society for Neuroscience. 39 [PubMed]

• Distinct integration properties of noisy inputs in active dendritic subunits (Poleg-Polsky 2019) [Model]

Poleg-Polsky A, Diamond JS. (2016). NMDA Receptors Multiplicatively Scale Visual Signals and Enhance Directional Motion Discrimination in Retinal Ganglion Cells. Neuron. 89 [PubMed]

• Multiplication by NMDA receptors in Direction Selective Ganglion cells (Poleg-Polsky & Diamond 2016) [Model]

Schmidt-Hieber C et al. (2017). Active dendritic integration as a mechanism for robust and precise grid cell firing. Nature neuroscience. 20 [PubMed]

• Active dendritic integration in robust and precise grid cell firing (Schmidt-Hieber et al 2017) [Model]

Schulz JM, Knoflach F, Hernandez MC, Bischofberger J. (2018). Dendrite-targeting interneurons control synaptic NMDA-receptor activation via nonlinear a5-GABAA receptors. Nature communications. 9 [PubMed]

• CA1 pyramidal neuron: nonlinear a5-GABAAR controls synaptic NMDAR activation (Schulz et al 2018) [Model]
• Single compartment: nonlinear a5-GABAAR controls synaptic NMDAR activation (Schulz et al 2018) [Model]

Sun Q, Srinivas KV, Sotayo A, Siegelbaum SA. (2014). Dendritic Na+ spikes enable cortical input to drive action potential output from hippocampal CA2 pyramidal neurons. eLife. 3 [PubMed]

Ujfalussy BB, Makara JK, Lengyel M, Branco T. (2018). Global and Multiplexed Dendritic Computations under In Vivo-like Conditions. Neuron. 100 [PubMed]

• Global and multiplexed dendritic computations under in vivo-like conditions (Ujfalussy et al 2018) [Model]

Yang GR, Murray JD, Wang XJ. (2016). A dendritic disinhibitory circuit mechanism for pathway-specific gating. Nature communications. 7 [PubMed]

• A dendritic disinhibitory circuit mechanism for pathway-specific gating (Yang et al. 2016) [Model]