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• CA3 Radiatum/Lacunosum-Moleculare interneuron, Ih (Anderson et al. 2011) [Model]

Bal R, Oertel D. (2000). Hyperpolarization-activated, mixed-cation current (I(h)) in octopus cells of the mammalian cochlear nucleus. Journal of neurophysiology. 84 [PubMed]

• CN Octopus Cell: Ih current (Bal, Oertel 2000) [Model]

Bazhenov M, Timofeev I, Steriade M, Sejnowski T. (2000). Spiking-bursting activity in the thalamic reticular nucleus initiates sequences of spindle oscillations in thalamic networks. Journal of neurophysiology. 84 [PubMed]

Bazhenov M, Timofeev I, Steriade M, Sejnowski TJ. (1998). Computational models of thalamocortical augmenting responses. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

• Thalamocortical augmenting response (Bazhenov et al 1998) [Model]

Bazhenov M, Timofeev I, Steriade M, Sejnowski TJ. (2002). Model of thalamocortical slow-wave sleep oscillations and transitions to activated States. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

• Sleep-wake transitions in corticothalamic system (Bazhenov et al 2002) [Model]

Birdno MJ et al. (2012). Stimulus features underlying reduced tremor suppression with temporally patterned deep brain stimulation. Journal of neurophysiology. 107 [PubMed]

• Thalamic network model of deep brain stimulation in essential tremor (Birdno et al. 2012) [Model]

Blethyn KL, Hughes SW, Tóth TI, Cope DW, Crunelli V. (2006). Neuronal basis of the slow (<1 Hz) oscillation in neurons of the nucleus reticularis thalami in vitro. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Budde T et al. (2008). Reciprocal modulation of I (h) and I (TASK) in thalamocortical relay neurons by halothane. Pflugers Archiv : European journal of physiology. 456 [PubMed]

Chan CS, Shigemoto R, Mercer JN, Surmeier DJ. (2004). HCN2 and HCN1 channels govern the regularity of autonomous pacemaking and synaptic resetting in globus pallidus neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

Chemin J et al. (2002). Specific contribution of human T-type calcium channel isotypes (alpha(1G), alpha(1H) and alpha(1I)) to neuronal excitability. The Journal of physiology. 540 [PubMed]

Chen S, Wang J, Siegelbaum SA. (2001). Properties of hyperpolarization-activated pacemaker current defined by coassembly of HCN1 and HCN2 subunits and basal modulation by cyclic nucleotide. The Journal of general physiology. 117 [PubMed]

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• Rat LGN Thalamocortical Neuron (Connelly et al 2015, 2016) [Model]

Destexhe A, Babloyantz A, Sejnowski TJ. (1993). Ionic mechanisms for intrinsic slow oscillations in thalamic relay neurons. Biophysical journal. 65 [PubMed]

• Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018) [Model]

Destexhe A, Bal T, McCormick DA, Sejnowski TJ. (1996). Ionic mechanisms underlying synchronized oscillations and propagating waves in a model of ferret thalamic slices. Journal of neurophysiology. 76 [PubMed]

• Thalamocortical and Thalamic Reticular Network (Destexhe et al 1996) [Model]
• Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018) [Model]

Destexhe A, Contreras D, Sejnowski TJ, Steriade M. (1994). A model of spindle rhythmicity in the isolated thalamic reticular nucleus. Journal of neurophysiology. 72 [PubMed]

• Thalamic Reticular Network (Destexhe et al 1994) [Model]

Destexhe A, Contreras D, Steriade M. (1998). Mechanisms underlying the synchronizing action of corticothalamic feedback through inhibition of thalamic relay cells. Journal of neurophysiology. 79 [PubMed]

• Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001) [Model]

Destexhe A, McCormick DA, Sejnowski TJ. (1993). A model for 8-10 Hz spindling in interconnected thalamic relay and reticularis neurons. Biophysical journal. 65 [PubMed]

Destexhe A, Sejnowski TJ. (2003). Interactions between membrane conductances underlying thalamocortical slow-wave oscillations. Physiological reviews. 83 [PubMed]

Dewell RB, Gabbiani F. (2018). Biophysics of object segmentation in a collision-detecting neuron. eLife. 7 [PubMed]

• LGMD with 3D morphology and active dendrites (Dewell & Gabbiani 2018) [Model]

Doiron B, Noonan L, Lemon N, Turner RW. (2003). Persistent Na+ current modifies burst discharge by regulating conditional backpropagation of dendritic spikes. Journal of neurophysiology. 89 [PubMed]

Gabbiani F, Midtgaard J, Knöpfel T. (1994). Synaptic integration in a model of cerebellar granule cells. Journal of neurophysiology. 72 [PubMed]

• Synaptic integration in a model of granule cells (Gabbiani et al 1994) [Model]

Guo T et al. (2016). Electrical activity of ON and OFF retinal ganglion cells: a modelling study. Journal of neural engineering. 13 [PubMed]

• Retinal ganglion cells responses and activity (Tsai et al 2012, Guo et al 2016) [Model]

Hadipour Niktarash A. (2003). Transmission of the subthalamic nucleus oscillatory activity to the cortex: a computational approach. Journal of computational neuroscience. 15 [PubMed]

Hadipour-Niktarash A. (2006). A computational model of how an interaction between the thalamocortical and thalamic reticular neurons transforms the low-frequency oscillations of the globus pallidus. Journal of computational neuroscience. 20 [PubMed]

• Thalamic transformation of pallidal input (Hadipour-Niktarash 2006) [Model]

Halnes G, Augustinaite S, Heggelund P, Einevoll GT, Migliore M. (2011). A multi-compartment model for interneurons in the dorsal lateral geniculate nucleus. PLoS computational biology. 7 [PubMed]

• A multi-compartment model for interneurons in the dLGN (Halnes et al. 2011) [Model]

Hynna KM, Boahen K. (2007). Thermodynamically equivalent silicon models of voltage-dependent ion channels. Neural computation. 19 [PubMed]

Häusser M, Monsivais P. (2003). Less means more: inhibition of spontaneous firing triggers persistent increases in excitability. Neuron. 40 [PubMed]

Iavarone E et al. (2019). Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons. PLoS computational biology. 15 [PubMed]

• Thalamocortical relay neuron models constrained by experiment and optimization (Iavarone et al 2019) [Model]

Jercog D et al. (2017). UP-DOWN cortical dynamics reflect state transitions in a bistable network. eLife. 6 [PubMed]

• Models for cortical UP-DOWN states in a bistable inhibitory-stabilized network (Jercog et al 2017) [Model]

Jones SR, Pinto DJ, Kaper TJ, Kopell N. (2000). Alpha-frequency rhythms desynchronize over long cortical distances: a modeling study. Journal of computational neuroscience. 9 [PubMed]

Kole MH, Hallermann S, Stuart GJ. (2006). Single Ih channels in pyramidal neuron dendrites: properties, distribution, and impact on action potential output. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

• Stochastic Ih and Na-channels in pyramidal neuron dendrites (Kole et al 2006) [Model]

Kopp-Scheinpflug C et al. (2011). The sound of silence: ionic mechanisms encoding sound termination. Neuron. 71 [PubMed]

• Superior paraolivary nucleus neuron (Kopp-Scheinpflug et al. 2011) [Model]

Li G, Henriquez CS, Fröhlich F. (2017). Unified Thalamic Model Generates Multiple Distinct Oscillations with State-dependent Entrainment by Stimulation PLOS Computational Biology. 13(10)

• A unified thalamic model of multiple distinct oscillations (Li, Henriquez and Fröhlich 2017) [Model]

Lytton WW, Contreras D, Destexhe A, Steriade M. (1997). Dynamic interactions determine partial thalamic quiescence in a computer network model of spike-and-wave seizures. Journal of neurophysiology. 77 [PubMed]

• Thalamic quiescence of spike and wave seizures (Lytton et al 1997) [Model]

Lytton WW, Destexhe A, Sejnowski TJ. (1996). Control of slow oscillations in the thalamocortical neuron: a computer model. Neuroscience. 70 [PubMed]

Lytton WW, Sejnowski TJ. (1992). Computer model of ethosuximide's effect on a thalamic neuron. Annals of neurology. 32 [PubMed]

Meuth SG et al. (2006). Membrane resting potential of thalamocortical relay neurons is shaped by the interaction among TASK3 and HCN2 channels. Journal of neurophysiology. 96 [PubMed]

Migliore M, Shepherd GM. (2002). Emerging rules for the distributions of active dendritic conductances. Nature reviews. Neuroscience. 3 [PubMed]

• Modulation of temporal integration window (Migliore, Shepherd 2002) [Model]

Mukherjee P, Kaplan E. (1995). Dynamics of neurons in the cat lateral geniculate nucleus: in vivo electrophysiology and computational modeling. Journal of neurophysiology. 74 [PubMed]

Mäki-Marttunen T, Mäki-Marttunen V. (2022). Excitatory and inhibitory effects of HCN channel modulation on excitability of layer V pyramidal cells PLoS computational biology. 18 [PubMed]

• Simulations of modulation of HCN channels in L5PCs (Mäki-Marttunen and Mäki-Marttunen, 2022) [Model]

Orio P et al. (2012). Role of Ih in the firing pattern of mammalian cold thermoreceptor endings. Journal of neurophysiology. 108 [PubMed]

• Role of Ih in firing patterns of cold thermoreceptors (Orio et al., 2012) [Model]

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Smith GD, Cox CL, Sherman SM, Rinzel J. (2000). Fourier analysis of sinusoidally driven thalamocortical relay neurons and a minimal integrate-and-fire-or-burst model. Journal of neurophysiology. 83 [PubMed]

Surkis A, Peskin CS, Tranchina D, Leonard CS. (1998). Recovery of cable properties through active and passive modeling of subthreshold membrane responses from laterodorsal tegmental neurons. Journal of neurophysiology. 80 [PubMed]

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Wang XJ. (1994). Multiple dynamical modes of thalamic relay neurons: rhythmic bursting and intermittent phase-locking. Neuroscience. 59 [PubMed]

• Multiple dynamical modes of thalamic relay neurons (Wang XJ 1994) [Model]

Wang XJ, Rinzel J, Rogawski MA. (1991). A model of the T-type calcium current and the low-threshold spike in thalamic neurons. Journal of neurophysiology. 66 [PubMed]

• T-type Ca current in thalamic neurons (Wang et al 1991) [Model]

Williams SR, Christensen SR, Stuart GJ, Häusser M. (2002). Membrane potential bistability is controlled by the hyperpolarization-activated current I(H) in rat cerebellar Purkinje neurons in vitro. The Journal of physiology. 539 [PubMed]

Winograd M, Destexhe A, Sanchez-Vives MV. (2008). Hyperpolarization-activated graded persistent activity in the prefrontal cortex. Proceedings of the National Academy of Sciences of the United States of America. 105 [PubMed]

• Hodgkin-Huxley model of persistent activity in prefrontal cortex neurons (Winograd et al. 2008) [Model]
• Hodgkin-Huxley model of persistent activity in PFC neurons (Winograd et al. 2008) (NEURON python) [Model]

Zeldenrust F, Chameau P, Wadman WJ. (2018). Spike and burst coding in thalamocortical relay cells. PLoS computational biology. 14 [PubMed]

• Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018) [Model]

Zhu JJ, Lytton WW, Xue JT, Uhlrich DJ. (1999). An intrinsic oscillation in interneurons of the rat lateral geniculate nucleus. Journal of neurophysiology. 81 [PubMed]

• Thalamic interneuron multicompartment model (Zhu et al. 1999) [Model]

Zhu JJ, Uhlrich DJ, Lytton WW. (1999). Properties of a hyperpolarization-activated cation current in interneurons in the rat lateral geniculate nucleus. Neuroscience. 92 [PubMed]

Zhu JJ, Uhlrich DJ, Lytton WW. (1999). Burst firing in identified rat geniculate interneurons. Neuroscience. 91 [PubMed]

• Thalamic interneuron multicompartment model (Zhu et al. 1999) [Model]