Baker JL, Perez-Rosello T, Migliore M, Barrionuevo G, Ascoli GA. (2011). A computer model of unitary responses from associational/commissural and perforant path synapses in hippocampal CA3 pyramidal cells. Journal of computational neuroscience. 31 [PubMed]
Barreto E, Cressman JR. (2011). Ion concentration dynamics as a mechanism for neuronal bursting. Journal of biological physics. 37 [PubMed]
Beck JM, Pouget A. (2007). Exact inferences in a neural implementation of a hidden Markov model. Neural computation. 19 [PubMed]
Bittner KC, Milstein AD, Grienberger C, Romani S, Magee JC. (2017). Behavioral time scale synaptic plasticity underlies CA1 place fields. Science (New York, N.Y.). 357 [PubMed]
Booth V, Xique I, Diniz Behn C. (2017). One-Dimensional Map for the Circadian Modulation of Sleep in a Sleep-Wake Regulatory Network Model for Human Sleep SIAM Journal on Applied Dynamical Systems. 16
Calì C et al. (2008). Inferring connection proximity in networks of electrically coupled cells by subthreshold frequency response analysis. Journal of computational neuroscience. 24 [PubMed]
Caplan JS, Williams AH, Marder E. (2014). Many parameter sets in a multicompartment model oscillator are robust to temperature perturbations. The Journal of neuroscience : the official journal of the Society for Neuroscience. 34 [PubMed]
Dudman JT, Nolan MF. (2009). Stochastically gating ion channels enable patterned spike firing through activity-dependent modulation of spike probability. PLoS computational biology. 5 [PubMed]
Ermentrout GB, Terman DH. (2010). Mathematical Foundations of Neuroscience Interdisciplinary Applied Mathematics. 35
Esposito U, Giugliano M, van Rossum M, Vasilaki E. (2014). Measuring symmetry, asymmetry and randomness in neural network connectivity. PloS one. 9 [PubMed]
Fountas Z, Shanahan M. (2017). The role of cortical oscillations in a spiking neural network model of the basal ganglia. PloS one. 12 [PubMed]
Földy C, Aradi I, Howard A, Soltesz I. (2004). Diversity beyond variance: modulation of firing rates and network coherence by GABAergic subpopulations. The European journal of neuroscience. 19 [PubMed]
Girard B, Tabareau N, Pham QC, Berthoz A, Slotine JJ. (2008). Where neuroscience and dynamic system theory meet autonomous robotics: a contracting basal ganglia model for action selection. Neural networks : the official journal of the International Neural Network Society. 21 [PubMed]
Giugliano M, Gambazzi L, Ballerini L, Prato M, Campidelli S. (2012). Carbon nanotubes as electrical interfaces to neurons Nanotechnology for Biology and Medicine.
Gloveli T et al. (2005). Orthogonal arrangement of rhythm-generating microcircuits in the hippocampus. Proceedings of the National Academy of Sciences of the United States of America. 102 [PubMed]
Goldberg DH, Andreou AG. (2007). Distortion of neural signals by spike coding. Neural computation. 19 [PubMed]
Goldwyn JH, Imennov NS, Famulare M, Shea-Brown E. (2011). Stochastic differential equation models for ion channel noise in Hodgkin-Huxley neurons. Physical review. E, Statistical, nonlinear, and soft matter physics. 83 [PubMed]
Goldwyn JH, Shea-Brown E. (2011). The what and where of adding channel noise to the Hodgkin-Huxley equations. PLoS computational biology. 7 [PubMed]
Humphries MD, Gurney K. (2007). Solution methods for a new class of simple model neurons. Neural computation. 19 [PubMed]
Huys QJ, Paninski L. (2009). Smoothing of, and parameter estimation from, noisy biophysical recordings. PLoS computational biology. 5 [PubMed]
Jolivet R, Lewis TJ, Gerstner W. (2004). Generalized integrate-and-fire models of neuronal activity approximate spike trains of a detailed model to a high degree of accuracy. Journal of neurophysiology. 92 [PubMed]
Kerr CC et al. (2013). Cortical information flow in Parkinson's disease: a composite network/field model. Frontiers in computational neuroscience. 7 [PubMed]
Kilinc D, Demir A. (2015). Simulation of noise in neurons and neuronal circuits Proceedings of the IEEE/ACM international conference on computer-aided design (ICCAD).
Kilinc D, Demir A. (2017). Noise in Neuronal and Electronic Circuits: A General Modeling Framework and Non-Monte Carlo Simulation Techniques. IEEE transactions on biomedical circuits and systems. 11 [PubMed]
Kilinc D, Demir A. (2018). Spike timing precision of neuronal circuits. Journal of computational neuroscience. 44 [PubMed]
Kim H, Bao S. (2008). Distributed representation of perceptual categories in the auditory cortex. Journal of computational neuroscience. 24 [PubMed]
Kim J, Leahy W, Shlizerman E. (2019). Neural Interactome: Interactive Simulation of a Neuronal System. Frontiers in computational neuroscience. 13 [PubMed]
Kumar A, Schrader S, Aertsen A, Rotter S. (2008). The high-conductance state of cortical networks. Neural computation. 20 [PubMed]
Laing CR, Longtin A. (2003). Dynamics of deterministic and stochastic paired excitatory-inhibitory delayed feedback. Neural computation. 15 [PubMed]
Lian Y, Grayden DB, Kameneva T, Meffin H, Burkitt AN. (2019). Toward a Biologically Plausible Model of LGN-V1 Pathways Based on Efficient Coding Frontiers in Neural Circuits. 13
Linaro D, Ocker GK, Doiron B, Giugliano M. (2019). Correlation Transfer by Layer 5 Cortical Neurons Under Recreated Synaptic Inputs In Vitro. The Journal of neuroscience : the official journal of the Society for Neuroscience. 39 [PubMed]
Linaro D, Storace M, Giugliano M. (2011). Accurate and fast simulation of channel noise in conductance-based model neurons by diffusion approximation. PLoS computational biology. 7 [PubMed]
Machens CK, Brody CD. (2008). Design of continuous attractor networks with monotonic tuning using a symmetry principle. Neural computation. 20 [PubMed]
Maia PD, Kutz JN. (2014). Compromised axonal functionality after neurodegeneration, concussion and/or traumatic brain injury. Journal of computational neuroscience. 37 [PubMed]
Masuda N, Okada M, Aihara K. (2007). Filtering of spatial bias and noise inputs by spatially structured neural networks. Neural computation. 19 [PubMed]
Monaco JD, Knierim JJ, Zhang K. (2011). Sensory feedback, error correction, and remapping in a multiple oscillator model of place cell activity Frontiers in computational neuroscience. 5 [PubMed]
Moradi K et al. (2013). A fast model of voltage-dependent NMDA receptors. Journal of computational neuroscience. 34 [PubMed]
Muller E, Buesing L, Schemmel J, Meier K. (2007). Spike-frequency adapting neural ensembles: beyond mean adaptation and renewal theories. Neural computation. 19 [PubMed]
Muresan RC, Savin C. (2007). Resonance or integration? Self-sustained dynamics and excitability of neural microcircuits. Journal of neurophysiology. 97 [PubMed]
Norheim ES, Wyller J, Nordlie E, Einevoll GT. (2012). A minimal mechanistic model for temporal signal processing in the lateral geniculate nucleus. Cognitive neurodynamics. 6 [PubMed]
Paninski L. (2006). The spike-triggered average of the integrate-and-fire cell driven by gaussian white noise. Neural computation. 18 [PubMed]
Paninski L, Pillow JW, Simoncelli EP. (2004). Maximum likelihood estimation of a stochastic integrate-and-fire neural encoding model. Neural computation. 16 [PubMed]
Rakowski F, Karbowski J. (2017). Optimal synaptic signaling connectome for locomotory behavior in Caenorhabditis elegans: Design minimizing energy cost. PLoS computational biology. 13 [PubMed]
Rössert C, Moore LE, Straka H, Glasauer S. (2011). Cellular and network contributions to vestibular signal processing: impact of ion conductances, synaptic inhibition, and noise. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]
Rössert C, Solinas S, D'Angelo E, Dean P, Porrill J. (2014). Model cerebellar granule cells can faithfully transmit modulated firing rate signals. Frontiers in cellular neuroscience. 8 [PubMed]
Sakai Y, Fukai T. (2008). The actor-critic learning is behind the matching law: matching versus optimal behaviors. Neural computation. 20 [PubMed]
Salazar-Gatzimas E et al. (2016). Direct Measurement of Correlation Responses in Drosophila Elementary Motion Detectors Reveals Fast Timescale Tuning. Neuron. 92 [PubMed]
Shimazaki H, Shinomoto S. (2007). A method for selecting the bin size of a time histogram. Neural computation. 19 [PubMed]
Spain WJ, Fairhall AL, Lundstrom BN, Famulare M, Sorensen LB. (2009). Sensitivity of firing rate to input fluctuations depends on time scale separation between fast and slow variables in single neurons J Comput Neurosci. in press
Sterratt DC, Graham B, Gillies A, Willshaw D. (2011). Principles of Computational Modelling in Neuroscience, Cambridge University Press.
Tejada J, Arisi GM, García-Cairasco N, Roque AC. (2012). Morphological alterations in newly born dentate gyrus granule cells that emerge after status epilepticus contribute to make them less excitable. PloS one. 7 [PubMed]
Teka W, Marinov TM, Santamaria F. (2014). Neuronal spike timing adaptation described with a fractional leaky integrate-and-fire model. PLoS computational biology. 10 [PubMed]
Tikidji-Hamburyan RA, El-Ghazawi TA, Narayana V, Bozkus Z. (2017). Software for Brain Network Simulations: A Comparative Study Front. Neuroinform..
Tomov P, Pena RF, Zaks MA, Roque AC. (2014). Sustained oscillations, irregular firing, and chaotic dynamics in hierarchical modular networks with mixtures of electrophysiological cell types. Frontiers in computational neuroscience. 8 [PubMed]
Toyoizumi T, Pfister JP, Aihara K, Gerstner W. (2007). Optimality model of unsupervised spike-timing-dependent plasticity: synaptic memory and weight distribution. Neural computation. 19 [PubMed]
Triesch J. (2007). Synergies between intrinsic and synaptic plasticity mechanisms. Neural computation. 19 [PubMed]
Vasilaki E, Giugliano M. (2014). Emergence of connectivity motifs in networks of model neurons with short- and long-term plastic synapses. PloS one. 9 [PubMed]
Vogelstein RJ, Mallik U, Culurciello E, Cauwenberghs G, Etienne-Cummings R. (2007). A multichip neuromorphic system for spike-based visual information processing. Neural computation. 19 [PubMed]
Zachariou M, Alexander SP, Coombes S, Christodoulou C. (2013). A biophysical model of endocannabinoid-mediated short term depression in hippocampal inhibition. PloS one. 8 [PubMed]
van Elburg RA, van Ooyen A. (2010). Impact of dendritic size and dendritic topology on burst firing in pyramidal cells. PLoS computational biology. 6 [PubMed]