Ariav G, Polsky A, Schiller J. (2003). Submillisecond precision of the input-output transformation function mediated by fast sodium dendritic spikes in basal dendrites of CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Azouz R. (2005). Dynamic spatiotemporal synaptic integration in cortical neurons: neuronal gain, revisited. Journal of neurophysiology. 94 [PubMed]

Behabadi BF, Mel BW. (2014). Mechanisms underlying subunit independence in pyramidal neuron dendrites. Proceedings of the National Academy of Sciences of the United States of America. 111 [PubMed]

• Mechanisms underlying subunit independence in pyramidal neuron dendrites (Behabadi and Mel 2014) [Model]

Bilash OM, Chavlis S, Johnson CD, Poirazi P, Basu J. (2023). Lateral entorhinal cortex inputs modulate hippocampal dendritic excitability by recruiting a local disinhibitory microcircuit. Cell reports. 42 [PubMed]

• Hippocampal CA1 microcircuit model including somatic and dendritic inhibition (Bilash et al, 2023) [Model]

Bock T, Negrean A, Siegelbaum SA. (2022). Somatic depolarization enhances hippocampal CA1 dendritic spike propagation and distal input-driven synaptic plasticity The Journal of neuroscience : the official journal of the Society for Neuroscience. 42 [PubMed]

• Depolarization Enhacement of Dendritic Spike Propagation (Bock et al 2022) [Model]

Booth V, Poe GR. (2006). Input source and strength influences overall firing phase of model hippocampal CA1 pyramidal cells during theta: relevance to REM sleep reactivation and memory consolidation. Hippocampus. 16 [PubMed]

Branco T, Clark BA, Häusser M. (2010). Dendritic discrimination of temporal input sequences in cortical neurons. Science (New York, N.Y.). 329 [PubMed]

• Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010) [Model]

Branco T, Häusser M. (2011). Synaptic integration gradients in single cortical pyramidal cell dendrites. Neuron. 69 [PubMed]

• Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010) [Model]

Chen WR, Shen GY, Shepherd GM, Hines ML, Midtgaard J. (2002). Multiple modes of action potential initiation and propagation in mitral cell primary dendrite. Journal of neurophysiology. 88 [PubMed]

• Olfactory Mitral cell: AP initiation modes (Chen et al 2002) [Model]

Colbert CM, Pan E. (2002). Ion channel properties underlying axonal action potential initiation in pyramidal neurons. Nature neuroscience. 5 [PubMed]

Destexhe A, Rudolph M, Paré D. (2003). The high-conductance state of neocortical neurons in vivo. Nature reviews. Neuroscience. 4 [PubMed]

Diba K, Koch C, Segev I. (2006). Spike propagation in dendrites with stochastic ion channels. Journal of computational neuroscience. 20 [PubMed]

• Spike propagation in dendrites with stochastic ion channels (Diba et al. 2006) [Model]

Doiron B, Longtin A, Turner RW, Maler L. (2001). Model of gamma frequency burst discharge generated by conditional backpropagation. Journal of neurophysiology. 86 [PubMed]

Ferrante M, Migliore M, Ascoli GA. (2013). Functional impact of dendritic branch-point morphology. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

• Functional impact of dendritic branch point morphology (Ferrante et al., 2013) [Model]

Gasparini S, Migliore M, Magee JC. (2004). On the initiation and propagation of dendritic spikes in CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

• CA1 pyramidal neuron: dendritic spike initiation (Gasparini et al 2004) [Model]

Golding NL, Mickus TJ, Katz Y, Kath WL, Spruston N. (2005). Factors mediating powerful voltage attenuation along CA1 pyramidal neuron dendrites. The Journal of physiology. 568 [PubMed]

• Voltage attenuation in CA1 pyramidal neuron dendrites (Golding et al 2005) [Model]

Górski T et al. (2018). Dendritic sodium spikes endow neurons with inverse firing rate response to correlated synaptic activity. Journal of computational neuroscience. 45 [PubMed]

• Response to correlated synaptic input for HH/IF point neuron vs with dendrite (Górski et al 2018) [Model]

Hanson JE, Smith Y, Jaeger D. (2004). Sodium channels and dendritic spike initiation at excitatory synapses in globus pallidus neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

Hendrickson EB, Edgerton JR, Jaeger D. (2011). The capabilities and limitations of conductance-based compartmental neuron models with reduced branched or unbranched morphologies and active dendrites. Journal of computational neuroscience. 30 [PubMed]

• Comparison of full and reduced globus pallidus models (Hendrickson 2010) [Model]

Hsu CL, Zhao X, Milstein AD, Spruston N. (2018). Persistent sodium current mediates the steep voltage dependence of spatial coding in hippocampal pyramidal neurons Neuron. 99

• CA1 pyramidal neuron: Persistent Na current mediates steep synaptic amplification (Hsu et al 2018) [Model]

Hyun JH et al. (2015). Kv1.2 mediates heterosynaptic modulation of direct cortical synaptic inputs in CA3 pyramidal cells. The Journal of physiology. 593 [PubMed]

• CA3 pyramidal neurons: Kv1.2 mediates modulation of cortical inputs (Hyun et al., 2015) [Model]

Häusser M, Mel B. (2003). Dendrites: bug or feature? Current opinion in neurobiology. 13 [PubMed]

Häusser M, Spruston N, Stuart GJ. (2000). Diversity and dynamics of dendritic signaling. Science (New York, N.Y.). 290 [PubMed]

Jaffe DB, Carnevale NT. (1999). Passive normalization of synaptic integration influenced by dendritic architecture. Journal of neurophysiology. 82 [PubMed]

Jarsky T, Roxin A, Kath WL, Spruston N. (2005). Conditional dendritic spike propagation following distal synaptic activation of hippocampal CA1 pyramidal neurons. Nature neuroscience. 8 [PubMed]

• CA1 pyramidal neuron synaptic integration (Jarsky et al. 2005) [Model]

Katz Y et al. (2009). Synapse distribution suggests a two-stage model of dendritic integration in CA1 pyramidal neurons. Neuron. 63 [PubMed]

• A two-stage model of dendritic integration in CA1 pyramidal neurons (Katz et al. 2009) [Model]

Kim Y, Hsu CL, Cembrowski MS, Mensh BD, Spruston N. (2015). Dendritic sodium spikes are required for long-term potentiation at distal synapses on hippocampal pyramidal neurons. eLife. 4 [PubMed]

• CA1 pyramidal neuron: Dendritic Na+ spikes are required for LTP at distal synapses (Kim et al 2015) [Model]

Komendantov AO, Trayanova NA, Tasker JG. (2007). Somato-dendritic mechanisms underlying the electrophysiological properties of hypothalamic magnocellular neuroendocrine cells: a multicompartmental model study. Journal of computational neuroscience. 23 [PubMed]

Magee JC, Cook EP. (2000). Somatic EPSP amplitude is independent of synapse location in hippocampal pyramidal neurons. Nature neuroscience. 3 [PubMed]

• CA1 pyramidal neuron: Synaptic Scaling (Magee, Cook 2000) [Model]

Menon V et al. (2013). Balanced synaptic impact via distance-dependent synapse distribution and complementary expression of AMPARs and NMDARs in hippocampal dendrites. Neuron. 80 [PubMed]

• Distance-dependent synaptic strength in CA1 pyramidal neurons (Menon et al. 2013) [Model]

Menon V, Spruston N, Kath WL. (2009). A state-mutating genetic algorithm to design ion-channel models. Proceedings of the National Academy of Sciences of the United States of America. 106 [PubMed]

• Hippocampus CA1 pyramidal model with Na channel exhibiting slow inactivation (Menon et al. 2009) [Model]

Michalikova M, Remme MW, Kempter R. (2017). Spikelets in Pyramidal Neurons: Action Potentials Initiated in the Axon Initial Segment That Do Not Activate the Soma. PLoS computational biology. 13 [PubMed]

• Spikelet generation and AP initiation in a L5 neocortical pyr neuron (Michalikova et al. 2017) Fig 1 [Model]
• Spikelet generation and AP initiation in a simplified pyr neuron (Michalikova et al. 2017) Fig 3 [Model]

Migliore M, Ferrante M, Ascoli GA. (2005). Signal propagation in oblique dendrites of CA1 pyramidal cells. Journal of neurophysiology. 94 [PubMed]

• CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005) [Model]

Mittmann W, Chadderton P, Häusser M. (2004). Neuronal microcircuits: frequency-dependent flow of inhibition. Current biology : CB. 14 [PubMed]

Nicholson DA et al. (2006). Distance-dependent differences in synapse number and AMPA receptor expression in hippocampal CA1 pyramidal neurons. Neuron. 50 [PubMed]

Poirazi P, Brannon T, Mel BW. (2003). Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell. Neuron. 37 [PubMed]

• CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Poolos NP, Migliore M, Johnston D. (2002). Pharmacological upregulation of h-channels reduces the excitability of pyramidal neuron dendrites. Nature neuroscience. 5 [PubMed]

• CA1 pyramidal neuron: effects of Lamotrigine on dendritic excitability (Poolos et al 2002) [Model]

Rabinowitch I, Segev I. (2006). The interplay between homeostatic synaptic plasticity and functional dendritic compartments. Journal of neurophysiology. 96 [PubMed]

• Homeostatic synaptic plasticity (Rabinowitch and Segev 2006a,b) [Model]

Rabinowitch I, Segev I. (2006). The endurance and selectivity of spatial patterns of long-term potentiation/depression in dendrites under homeostatic synaptic plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

• Homeostatic synaptic plasticity (Rabinowitch and Segev 2006a,b) [Model]

Rindner DJ, Proddutur A, Lur G. (2022). Cell-type specific integration of feedforward and feedback synaptic inputs in the posterior parietal cortex Neuron. 110 [PubMed]

• Cell-type specific integration of feedforward and feedback synaptic inputs (Ridner et al, 2022) [Model]

Roberts CB, Best JA, Suter KJ. (2006). Dendritic processing of excitatory synaptic input in hypothalamic gonadotropin releasing-hormone neurons. Endocrinology. 147 [PubMed]

• Dendritic processing of excitatory synaptic input in GnRH neurons (Roberts et al. 2006) [Model]

Rudolph M, Destexhe A. (2003). A fast-conducting, stochastic integrative mode for neocortical neurons in vivo. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Shen GY, Chen WR, Midtgaard J, Shepherd GM, Hines ML. (1999). Computational analysis of action potential initiation in mitral cell soma and dendrites based on dual patch recordings. Journal of neurophysiology. 82 [PubMed]

• Action potential initiation in the olfactory mitral cell (Shen et al 1999) [Model]

Shu Y, Duque A, Yu Y, Haider B, McCormick DA. (2007). Properties of action-potential initiation in neocortical pyramidal cells: evidence from whole cell axon recordings. Journal of neurophysiology. 97 [PubMed]

• Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007) [Model]

Sun Q, Srinivas KV, Sotayo A, Siegelbaum SA. (2014). Dendritic Na+ spikes enable cortical input to drive action potential output from hippocampal CA2 pyramidal neurons. eLife. 3 [PubMed]

Tamosiunaite M, Porr B, Wörgötter F. (2007). Self-influencing synaptic plasticity: recurrent changes of synaptic weights can lead to specific functional properties. Journal of computational neuroscience. 23 [PubMed]

• Self-influencing synaptic plasticity (Tamosiunaite et al. 2007) [Model]

Ujfalussy BB, Makara JK, Lengyel M, Branco T. (2018). Global and Multiplexed Dendritic Computations under In Vivo-like Conditions. Neuron. 100 [PubMed]

• Global and multiplexed dendritic computations under in vivo-like conditions (Ujfalussy et al 2018) [Model]

Urban NN, Castro JB. (2005). Tuft calcium spikes in accessory olfactory bulb mitral cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Vetter P, Roth A, Häusser M. (2001). Propagation of action potentials in dendrites depends on dendritic morphology. Journal of neurophysiology. 85 [PubMed]

• Dendritica (Vetter et al 2001) [Model]

Williams SR, Stuart GJ. (2000). Action potential backpropagation and somato-dendritic distribution of ion channels in thalamocortical neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]

• Thalamic Relay Neuron: I-T current (Williams, Stuart 2000) [Model]

Williams SR, Stuart GJ. (2003). Role of dendritic synapse location in the control of action potential output. Trends in neurosciences. 26 [PubMed]