Bannister NJ, Larkman AU. (1995). Dendritic morphology of CA1 pyramidal neurones from the rat hippocampus: II. Spine distributions. The Journal of comparative neurology. 360 [PubMed]

Barrett JN, Crill WE. (1974). Specific membrane properties of cat motoneurones. The Journal of physiology. 239 [PubMed]

Berger T, Larkum ME, Lüscher HR. (2001). High I(h) channel density in the distal apical dendrite of layer V pyramidal cells increases bidirectional attenuation of EPSPs. Journal of neurophysiology. 85 [PubMed]

Bernander O, Douglas RJ, Martin KA, Koch C. (1991). Synaptic background activity influences spatiotemporal integration in single pyramidal cells. Proceedings of the National Academy of Sciences of the United States of America. 88 [PubMed]

Bush PC, Sejnowski TJ. (1993). Reduced compartmental models of neocortical pyramidal cells. Journal of neuroscience methods. 46 [PubMed]

Chitwood RA, Hubbard A, Jaffe DB. (1999). Passive electrotonic properties of rat hippocampal CA3 interneurones. The Journal of physiology. 515 ( Pt 3) [PubMed]

Clements JD, Redman SJ. (1989). Cable properties of cat spinal motoneurones measured by combining voltage clamp, current clamp and intracellular staining. The Journal of physiology. 409 [PubMed]

Desjardins AE, Li YX, Reinker S, Miura RM, Neuman RS. (2003). The influences of Ih on temporal summation in hippocampal CA1 pyramidal neurons: a modeling study. Journal of computational neuroscience. 15 [PubMed]

Durand D, Carlen PL, Gurevich N, Ho A, Kunov H. (1983). Electrotonic parameters of rat dentate granule cells measured using short current pulses and HRP staining. Journal of neurophysiology. 50 [PubMed]

Gentet LJ, Stuart GJ, Clements JD. (2000). Direct measurement of specific membrane capacitance in neurons. Biophysical journal. 79 [PubMed]

Golding NL, Jung HY, Mickus T, Spruston N. (1999). Dendritic calcium spike initiation and repolarization are controlled by distinct potassium channel subtypes in CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]

Golding NL, Kath WL, Spruston N. (2001). Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites. Journal of neurophysiology. 86 [PubMed]

• Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites (Golding et al 2001) [Model]

Golding NL, Spruston N. (1998). Dendritic sodium spikes are variable triggers of axonal action potentials in hippocampal CA1 pyramidal neurons. Neuron. 21 [PubMed]

Harris KM, Stevens JK. (1989). Dendritic spines of CA 1 pyramidal cells in the rat hippocampus: serial electron microscopy with reference to their biophysical characteristics. The Journal of neuroscience : the official journal of the Society for Neuroscience. 9 [PubMed]

Hines ML, Carnevale NT. (1997). The NEURON simulation environment. Neural computation. 9 [PubMed]

Holmes WR. (1989). The role of dendritic diameters in maximizing the effectiveness of synaptic inputs. Brain research. 478 [PubMed]

Jaffe DB, Carnevale NT. (1999). Passive normalization of synaptic integration influenced by dendritic architecture. Journal of neurophysiology. 82 [PubMed]

Krijnse-Locker J, Parton RG, Fuller SD, Griffiths G, Dotti CG. (1995). The organization of the endoplasmic reticulum and the intermediate compartment in cultured rat hippocampal neurons. Molecular biology of the cell. 6 [PubMed]

London M, Meunier C, Segev I. (1999). Signal transfer in passive dendrites with nonuniform membrane conductance. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]

Lörincz A, Notomi T, Tamás G, Shigemoto R, Nusser Z. (2002). Polarized and compartment-dependent distribution of HCN1 in pyramidal cell dendrites. Nature neuroscience. 5 [PubMed]

Maccaferri G, Mangoni M, Lazzari A, DiFrancesco D. (1993). Properties of the hyperpolarization-activated current in rat hippocampal CA1 pyramidal cells. Journal of neurophysiology. 69 [PubMed]

Magee JC. (1998). Dendritic hyperpolarization-activated currents modify the integrative properties of hippocampal CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Magee JC. (1999). Dendritic lh normalizes temporal summation in hippocampal CA1 neurons. Nature neuroscience. 2 [PubMed]

Magee JC, Cook EP. (2000). Somatic EPSP amplitude is independent of synapse location in hippocampal pyramidal neurons. Nature neuroscience. 3 [PubMed]

• CA1 pyramidal neuron: Synaptic Scaling (Magee, Cook 2000) [Model]

Major G, Larkman AU, Jonas P, Sakmann B, Jack JJ. (1994). Detailed passive cable models of whole-cell recorded CA3 pyramidal neurons in rat hippocampal slices. The Journal of neuroscience : the official journal of the Society for Neuroscience. 14 [PubMed]

Megías M, Emri Z, Freund TF, Gulyás AI. (2001). Total number and distribution of inhibitory and excitatory synapses on hippocampal CA1 pyramidal cells. Neuroscience. 102 [PubMed]

Meyer E, Müller CO, Fromherz P. (1997). Cable properties of dendrites in hippocampal neurons of the rat mapped by a voltage-sensitive dye. The European journal of neuroscience. 9 [PubMed]

Poolos NP, Bullis JB, Jones TD. (2004). stribution in pyramidal-like principal neurons in stratumradiatum of hippocampus differs from pyramidal neurons Program No. 52.9 2004 Abstract Vieuse-Itinerary Planner.

RALL W. (1959). Branching dendritic trees and motoneuron membrane resistivity. Experimental neurology. 1 [PubMed]

Rapp M, Segev I, Yarom Y. (1994). Physiology, morphology and detailed passive models of guinea-pig cerebellar Purkinje cells. The Journal of physiology. 474 [PubMed]

Santoro B, Grant SG, Bartsch D, Kandel ER. (1997). Interactive cloning with the SH3 domain of N-src identifies a new brain specific ion channel protein, with homology to eag and cyclic nucleotide-gated channels. Proceedings of the National Academy of Sciences of the United States of America. 94 [PubMed]

Segev I, Yarom Y, Rapp M. (1992). The impact of parallel fiber background activity on the cable properties of cerebellar Purkinje cells Neural Comput. 4

Shelton DP. (1985). Membrane resistivity estimated for the Purkinje neuron by means of a passive computer model. Neuroscience. 14 [PubMed]

Spacek J, Harris KM. (1997). Three-dimensional organization of smooth endoplasmic reticulum in hippocampal CA1 dendrites and dendritic spines of the immature and mature rat. The Journal of neuroscience : the official journal of the Society for Neuroscience. 17 [PubMed]

Spruston N, Johnston D. (1992). Perforated patch-clamp analysis of the passive membrane properties of three classes of hippocampal neurons. Journal of neurophysiology. 67 [PubMed]

Staff NP, Jung HY, Thiagarajan T, Yao M, Spruston N. (2000). Resting and active properties of pyramidal neurons in subiculum and CA1 of rat hippocampus. Journal of neurophysiology. 84 [PubMed]

Stuart G, Spruston N. (1998). Determinants of voltage attenuation in neocortical pyramidal neuron dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

• Pyramidal Neuron Deep: attenuation in dendrites (Stuart, Spruston 1998) [Model]

Stuart GJ, Dodt HU, Sakmann B. (1993). Patch-clamp recordings from the soma and dendrites of neurons in brain slices using infrared video microscopy. Pflugers Archiv : European journal of physiology. 423 [PubMed]

Thurbon D, Field A, Redman S. (1994). Electrotonic profiles of interneurons in stratum pyramidale of the CA1 region of rat hippocampus. Journal of neurophysiology. 71 [PubMed]

Thurbon D, Lüscher HR, Hofstetter T, Redman SJ. (1998). Passive electrical properties of ventral horn neurons in rat spinal cord slices. Journal of neurophysiology. 79 [PubMed]

Williams SR, Stuart GJ. (2000). Site independence of EPSP time course is mediated by dendritic I(h) in neocortical pyramidal neurons. Journal of neurophysiology. 83 [PubMed]

Ascoli GA, Gasparini S, Medinilla V, Migliore M. (2010). Local control of postinhibitory rebound spiking in CA1 pyramidal neuron dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

• CA1 pyramidal neuron: rebound spiking (Ascoli et al.2010) [Model]

Baker JL, Perez-Rosello T, Migliore M, Barrionuevo G, Ascoli GA. (2011). A computer model of unitary responses from associational/commissural and perforant path synapses in hippocampal CA3 pyramidal cells. Journal of computational neuroscience. 31 [PubMed]

• A model of unitary responses from A/C and PP synapses in CA3 pyramidal cells (Baker et al. 2010) [Model]

Basak R, Narayanan R. (2018). Active dendrites regulate the spatiotemporal spread of signaling microdomains. PLoS computational biology. 14 [PubMed]

• Active dendrites shape signaling microdomains in hippocampal neurons (Basak & Narayanan 2018) [Model]

Bloss EB et al. (2018). Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites. Nature neuroscience. 21 [PubMed]

• Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites (Bloss et al 2018) [Model]

Bock T, Negrean A, Siegelbaum SA. (2022). Somatic depolarization enhances hippocampal CA1 dendritic spike propagation and distal input-driven synaptic plasticity The Journal of neuroscience : the official journal of the Society for Neuroscience. 42 [PubMed]

• Depolarization Enhacement of Dendritic Spike Propagation (Bock et al 2022) [Model]

Cannon RC, O'Donnell C, Nolan MF. (2010). Stochastic ion channel gating in dendritic neurons: morphology dependence and probabilistic synaptic activation of dendritic spikes. PLoS computational biology. 6 [PubMed]

• Stochastic ion channels and neuronal morphology (Cannon et al. 2010) [Model]

Carnevale NT, Morse TM. (1996). Research reports that have used NEURON Web published citations at the NEURON website.

Cutsuridis V, Cobb S, Graham BP. (2010). Encoding and retrieval in a model of the hippocampal CA1 microcircuit. Hippocampus. 20 [PubMed]

• Encoding and retrieval in a model of the hippocampal CA1 microcircuit (Cutsuridis et al. 2009) [Model]

Cutsuridis V, Poirazi P. (2015). A computational study on how theta modulated inhibition can account for the long temporal windows in the entorhinal-hippocampal loop. Neurobiology of learning and memory. 120 [PubMed]

• Long time windows from theta modulated inhib. in entorhinal–hippo. loop (Cutsuridis & Poirazi 2015) [Model]

Das A, Narayanan R. (2015). Active dendrites mediate stratified gamma-range coincidence detection in hippocampal model neurons. The Journal of physiology. 593 [PubMed]

Eyal G et al. (2016). Unique membrane properties and enhanced signal processing in human neocortical neurons. eLife. 5 [PubMed]

• Human L2/3 pyramidal cells with low Cm values (Eyal et al. 2016) [Model]

Ferrante M, Ascoli GA. (2015). Distinct and synergistic feedforward inhibition of pyramidal cells by basket and bistratified interneurons. Frontiers in cellular neuroscience. 9 [PubMed]

• Feedforward inhibition in pyramidal cells (Ferrante & Ascoli 2015) [Model]

Gidon A, Segev I. (2012). Principles governing the operation of synaptic inhibition in dendrites. Neuron. 75 [PubMed]

• Principles governing the operation of synaptic inhibition in dendrites (Gidon & Segev 2012) [Model]

Hsu CL, Zhao X, Milstein AD, Spruston N. (2018). Persistent sodium current mediates the steep voltage dependence of spatial coding in hippocampal pyramidal neurons Neuron. 99

• CA1 pyramidal neuron: Persistent Na current mediates steep synaptic amplification (Hsu et al 2018) [Model]

Kalmbach BE et al. (2018). h-Channels Contribute to Divergent Intrinsic Membrane Properties of Supragranular Pyramidal Neurons in Human versus Mouse Cerebral Cortex. Neuron. 100 [PubMed]

Katz Y et al. (2009). Synapse distribution suggests a two-stage model of dendritic integration in CA1 pyramidal neurons. Neuron. 63 [PubMed]

• A two-stage model of dendritic integration in CA1 pyramidal neurons (Katz et al. 2009) [Model]

Kim Y, Hsu CL, Cembrowski MS, Mensh BD, Spruston N. (2015). Dendritic sodium spikes are required for long-term potentiation at distal synapses on hippocampal pyramidal neurons. eLife. 4 [PubMed]

• CA1 pyramidal neuron: Dendritic Na+ spikes are required for LTP at distal synapses (Kim et al 2015) [Model]

Komendantov AO, Ascoli GA. (2009). Dendritic excitability and neuronal morphology as determinants of synaptic efficacy. Journal of neurophysiology. 101 [PubMed]

Lewin N, Aksay E, Clancy CE. (2012). Computational modeling reveals dendritic origins of GABA(A)-mediated excitation in CA1 pyramidal neurons. PloS one. 7 [PubMed]

• Paradoxical GABA-mediated excitation (Lewin et al. 2012) [Model]

Lindroos R et al. (2018). Basal Ganglia Neuromodulation Over Multiple Temporal and Structural Scales-Simulations of Direct Pathway MSNs Investigate the Fast Onset of Dopaminergic Effects and Predict the Role of Kv4.2. Frontiers in neural circuits. 12 [PubMed]

• Striatal D1R medium spiny neuron, including a subcellular DA cascade (Lindroos et al 2018) [Model]

Medan V, Mäki-Marttunen T, Sztarker J, Preuss T. (2018). Differential processing in modality-specific Mauthner cell dendrites. The Journal of physiology. 596 [PubMed]

• Goldfish Mauthner cell (Medan et al 2017) [Model]

Menon V et al. (2013). Balanced synaptic impact via distance-dependent synapse distribution and complementary expression of AMPARs and NMDARs in hippocampal dendrites. Neuron. 80 [PubMed]

• Distance-dependent synaptic strength in CA1 pyramidal neurons (Menon et al. 2013) [Model]

Menon V, Spruston N, Kath WL. (2009). A state-mutating genetic algorithm to design ion-channel models. Proceedings of the National Academy of Sciences of the United States of America. 106 [PubMed]

• Hippocampus CA1 pyramidal model with Na channel exhibiting slow inactivation (Menon et al. 2009) [Model]

Morse TM, Carnevale NT, Mutalik PG, Migliore M, Shepherd GM. (2010). Abnormal Excitability of Oblique Dendrites Implicated in Early Alzheimer's: A Computational Study. Frontiers in neural circuits. 4 [PubMed]

• Amyloid beta (IA block) effects on a model CA1 pyramidal cell (Morse et al. 2010) [Model]

Narayanan R, Johnston D. (2008). The h channel mediates location dependence and plasticity of intrinsic phase response in rat hippocampal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

• Resonance properties through Chirp stimulus responses (Narayanan Johnston 2007, 2008) [Model]

Nicholson DA et al. (2006). Distance-dependent differences in synapse number and AMPA receptor expression in hippocampal CA1 pyramidal neurons. Neuron. 50 [PubMed]

Nörenberg A, Hu H, Vida I, Bartos M, Jonas P. (2010). Distinct nonuniform cable properties optimize rapid and efficient activation of fast-spiking GABAergic interneurons. Proceedings of the National Academy of Sciences of the United States of America. 107 [PubMed]

• Detailed passive cable model of Dentate Gyrus Basket Cells (Norenberg et al. 2010) [Model]

O'Connor S, Angelo K, Jacob TJ. (2012). Burst firing versus synchrony in a gap junction connected olfactory bulb mitral cell network model Frontiers in computational neuroscience. 6 [PubMed]

• Olfactory bulb mitral cell gap junction NN model: burst firing and synchrony (O`Connor et al. 2012) [Model]

Perreault MC, Raastad M. (2006). Contribution of morphology and membrane resistance to integration of fast synaptic signals in two thalamic cell types. The Journal of physiology. 577 [PubMed]

Reed JD, Blackwell KT. (2021). Prediction of Neural Diameter From Morphology to Enable Accurate Simulation. Frontiers in neuroinformatics. 15 [PubMed]

• Reconstructed neuron (cerebellar, hippocampal, striatal) sims using predicted diameters (Reed et al) [Model]

Reznik RI, Barreto E, Sander E, So P. (2016). Effects of polarization induced by non-weak electric fields on the excitability of elongated neurons with active dendrites. Journal of computational neuroscience. 40 [PubMed]

• Non-Weak E-Fields Pyramidal Neurons (Reznik et. al.,2015) [Model]

Schmidt-Hieber C, Jonas P, Bischofberger J. (2007). Subthreshold dendritic signal processing and coincidence detection in dentate gyrus granule cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 27 [PubMed]

• Dentate gyrus granule cell: subthreshold signal processing (Schmidt-Hieber et al. 2007) [Model]

Sekulić V, Chen TC, Lawrence JJ, Skinner FK. (2015). Dendritic distributions of I h channels in experimentally-derived multi-compartment models of oriens-lacunosum/moleculare (O-LM) hippocampal interneurons. Frontiers in synaptic neuroscience. 7 [PubMed]

• Multi-comp. CA1 O-LM interneuron model with varying dendritic Ih distributions (Sekulic et al 2015) [Model]

Szoboszlay M et al. (2016). Functional Properties of Dendritic Gap Junctions in Cerebellar Golgi Cells. Neuron. 90 [PubMed]

• Functional properties of dendritic gap junctions in Cerebellar Golgi cells (Szoboszlay et al. 2016) [Model]

Tomko M, Benuskova L, Jedlicka P. (2021). A new reduced-morphology model for CA1 pyramidal cells and its validation and comparison with other models using HippoUnit. Scientific reports. 11 [PubMed]

• Reduced-morphology model of CA1 pyramidal cells optimized + validated w/ HippoUnit (Tomko et al '21) [Model]

Venkadesh S et al. (2018). Evolving Simple Models of Diverse Intrinsic Dynamics in Hippocampal Neuron Types. Frontiers in neuroinformatics. 12 [PubMed]

• Evolving simple models of diverse dynamics in hippocampal neuron types (Venkadesh et al 2018) [Model]

Vervaeke K et al. (2010). Rapid desynchronization of an electrically coupled interneuron network with sparse excitatory synaptic input. Neuron. 67 [PubMed]

• Rapid desynchronization of an electrically coupled Golgi cell network (Vervaeke et al. 2010) [Model]

Winters BD, Jin SX, Ledford KR, Golding NL. (2017). Amplitude Normalization of Dendritic EPSPs at the Soma of Binaural Coincidence Detector Neurons of the Medial Superior Olive. The Journal of neuroscience : the official journal of the Society for Neuroscience. 37 [PubMed]