Acker CD, Antic SD. (2009). Quantitative assessment of the distributions of membrane conductances involved in action potential backpropagation along basal dendrites. Journal of neurophysiology. 101 [PubMed]
Aghvami SS, Müller M, Araabi BN, Egger V. (2019). Coincidence Detection within the Excitable Rat Olfactory Bulb Granule Cell Spines. The Journal of neuroscience : the official journal of the Society for Neuroscience. 39 [PubMed]
Ai H, Kai K, Kumaraswamy A, Ikeno H, Wachtler T. (2017). Interneurons in the Honeybee Primary Auditory Center Responding to Waggle Dance-Like Vibration Pulses. The Journal of neuroscience : the official journal of the Society for Neuroscience. 37 [PubMed]
Almog M, Korngreen A. (2014). A Quantitative Description of Dendritic Conductances and Its Application to Dendritic Excitation in Layer 5 Pyramidal Neurons The Journal of neuroscience : the official journal of the Society for Neuroscience. 34 [PubMed]
Alturki A, Feng F, Nair A, Guntu V, Nair SS. (2016). Distinct current modules shape cellular dynamics in model neurons. Neuroscience. 334 [PubMed]
Amatrudo JM et al. (2012). Influence of highly distinctive structural properties on the excitability of pyramidal neurons in monkey visual and prefrontal cortices. The Journal of neuroscience : the official journal of the Society for Neuroscience. 32 [PubMed]
Anderson RW, Farokhniaee A, Gunalan K, Howell B, McIntyre CC. (2018). Action potential initiation, propagation, and cortical invasion in the hyperdirect pathway during subthalamic deep brain stimulation Brain Stimulation.
Andreozzi E, Carannante I, D'Addio G, Cesarelli M, Balbi P. (2019). Phenomenological models of NaV1.5. A side by side, procedural, hands-on comparison between Hodgkin-Huxley and kinetic formalisms Scientific reports. 9 [PubMed]
Anwar H et al. (2014). Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Frontiers in cellular neuroscience. 8 [PubMed]
Arsiero M, Lüscher HR, Lundstrom BN, Giugliano M. (2007). The impact of input fluctuations on the frequency-current relationships of layer 5 pyramidal neurons in the rat medial prefrontal cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 27 [PubMed]
Ascoli GA, Gasparini S, Medinilla V, Migliore M. (2010). Local control of postinhibitory rebound spiking in CA1 pyramidal neuron dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]
Bahl A, Stemmler MB, Herz AV, Roth A. (2012). Automated optimization of a reduced layer 5 pyramidal cell model based on experimental data. Journal of neuroscience methods. 210 [PubMed]
Baker JL, Perez-Rosello T, Migliore M, Barrionuevo G, Ascoli GA. (2011). A computer model of unitary responses from associational/commissural and perforant path synapses in hippocampal CA3 pyramidal cells. Journal of computational neuroscience. 31 [PubMed]
Balbi P, Martinoia S, Colombo R, Massobrio P. (2014). Modelling recurrent discharge in the spinal a-motoneuron: reappraisal of the F wave. Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. 125 [PubMed]
Balbi P, Martinoia S, Massobrio P. (2015). Axon-somatic back-propagation in detailed models of spinal alpha motoneurons. Frontiers in computational neuroscience. 9 [PubMed]
Balbi P, Massobrio P, Hellgren Kotaleski J. (2017). A single Markov-type kinetic model accounting for the macroscopic currents of all human voltage-gated sodium channel isoforms. PLoS computational biology. 13 [PubMed]
Basak R, Narayanan R. (2018). Active dendrites regulate the spatiotemporal spread of signaling microdomains. PLoS computational biology. 14 [PubMed]
Behabadi BF, Polsky A, Jadi M, Schiller J, Mel BW. (2012). Location-dependent excitatory synaptic interactions in pyramidal neuron dendrites. PLoS computational biology. 8 [PubMed]
Berzhanskaya J, Chernyy N, Gluckman BJ, Schiff SJ, Ascoli GA. (2013). Modulation of hippocampal rhythms by subthreshold electric fields and network topology. Journal of computational neuroscience. 34 [PubMed]
Bezaire MJ, Raikov I, Burk K, Vyas D, Soltesz I. (2016). Interneuronal mechanisms of hippocampal theta oscillations in a full-scale model of the rodent CA1 circuit. eLife. 5 [PubMed]
Brette R, Goodman DF. (2011). Vectorized algorithms for spiking neural network simulation. Neural computation. 23 [PubMed]
Brette R et al. (2007). Simulation of networks of spiking neurons: a review of tools and strategies. Journal of computational neuroscience. 23 [PubMed]
Briant LJ, Stalbovskiy AO, Nolan MF, Champneys AR, Pickering AE. (2014). Increased intrinsic excitability of muscle vasoconstrictor preganglionic neurons may contribute to the elevated sympathetic activity in hypertensive rats. Journal of neurophysiology. 112 [PubMed]
Calì C et al. (2008). Inferring connection proximity in networks of electrically coupled cells by subthreshold frequency response analysis. Journal of computational neuroscience. 24 [PubMed]
Carnevale NT, Morse TM. (1996). Research reports that have used NEURON Web published citations at the NEURON website.
Casale AE, McCormick DA. (2011). Active action potential propagation but not initiation in thalamic interneuron dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]
Cattani A, Solinas S, Canuto C. (2016). A Hybrid Model for the Computationally-Efficient Simulation of the Cerebellar Granular Layer. Frontiers in computational neuroscience. 10 [PubMed]
Chadderdon GL et al. (2014). Motor cortex microcircuit simulation based on brain activity mapping. Neural computation. 26 [PubMed]
Chadderdon GL, Neymotin SA, Kerr CC, Lytton WW. (2012). Reinforcement learning of targeted movement in a spiking neuronal model of motor cortex. PloS one. 7 [PubMed]
Chambers JD et al. (2012). Parametric computation predicts a multiplicative interaction between synaptic strength parameters that control gamma oscillations. Frontiers in computational neuroscience. 6 [PubMed]
Chen W, De Schutter E. (2014). Python-based geometry preparation and simulation visualization toolkits for STEPS. Frontiers in neuroinformatics. 8 [PubMed]
Cisi RR, Kohn AF. (2008). Simulation system of spinal cord motor nuclei and associated nerves and muscles, in a Web-based architecture. Journal of computational neuroscience. 25 [PubMed]
Connelly WM, Crunelli V, Errington AC. (2015). The Global Spike: Conserved Dendritic Properties Enable Unique Ca2+ Spike Generation in Low-Threshold Spiking Neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 35 [PubMed]
Coskren PJ et al. (2015). Functional consequences of age-related morphologic changes to pyramidal neurons of the rhesus monkey prefrontal cortex. Journal of computational neuroscience. 38 [PubMed]
Deitcher Y et al. (2017). Comprehensive Morpho-Electrotonic Analysis Shows 2 Distinct Classes of L2 and L3 Pyramidal Neurons in Human Temporal Cortex. Cerebral cortex (New York, N.Y. : 1991). 27 [PubMed]
Doron M, Chindemi G, Muller E, Markram H, Segev I. (2017). Timed Synaptic Inhibition Shapes NMDA Spikes, Influencing Local Dendritic Processing and Global I/O Properties of Cortical Neurons. Cell reports. 21 [PubMed]
Dover K et al. (2016). FHF-independent conduction of action potentials along the leak-resistant cerebellar granule cell axon. Nature communications. 7 [PubMed]
Doyon N et al. (2011). Efficacy of synaptic inhibition depends on multiple, dynamically interacting mechanisms implicated in chloride homeostasis. PLoS computational biology. 7 [PubMed]
Dura-Bernal S et al. (2015). Cortical Spiking Network Interfaced with Virtual Musculoskeletal Arm and Robotic Arm. Frontiers in neurorobotics. 9 [PubMed]
Eguchi A, Neymotin SA, Stringer SM. (2014). Color opponent receptive fields self-organize in a biophysical model of visual cortex via spike-timing dependent plasticity Frontiers in neural circuits. 8 [PubMed]
Einevoll GT, Ness TV, Miceli S. (2017). Impedance Spectrum in Cortical Tissue: Implications for Propagation of LFP Signals on the Microscopic Level Eneuro. 4
Ermentrout GB, Terman DH. (2010). Mathematical Foundations of Neuroscience Interdisciplinary Applied Mathematics. 35
Eyal G et al. (2018). Human Cortical Pyramidal Neurons: From Spines to Spikes via Models. Frontiers in cellular neuroscience. 12 [PubMed]
Eyal G et al. (2016). Unique membrane properties and enhanced signal processing in human neocortical neurons. eLife. 5 [PubMed]
Ferguson KA et al. (2015). Network models provide insights into how oriens-lacunosum-moleculare and bistratified cell interactions influence the power of local hippocampal CA1 theta oscillations. Frontiers in systems neuroscience. 9 [PubMed]
Ferrario A, Merrison-Hort R, Soffe SR, Borisyuk R. (2018). Structural and functional properties of a probabilistic model of neuronal connectivity in a simple locomotor network. eLife. 7 [PubMed]
Forrest MD. (2015). Simulation of alcohol action upon a detailed Purkinje neuron model and a simpler surrogate model that runs >400 times faster. BMC neuroscience. 16 [PubMed]
Foutz TJ, Arlow RL, McIntyre CC. (2012). Theoretical principles underlying optical stimulation of a channelrhodopsin-2 positive pyramidal neuron. Journal of neurophysiology. 107 [PubMed]
Friedrich P, Vella M, Gulyás AI, Freund TF, Káli S. (2014). A flexible, interactive software tool for fitting the parameters of neuronal models. Frontiers in neuroinformatics. 8 [PubMed]
Gabbiani F, Cox SJ. (2010). Mathematics for Neuroscientists.
Giugliano M, Gambazzi L, Ballerini L, Prato M, Campidelli S. (2012). Carbon nanotubes as electrical interfaces to neurons Nanotechnology for Biology and Medicine.
Gleeson P et al. (2010). NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail. PLoS computational biology. 6 [PubMed]
Goodliffe JW et al. (2018). Differential changes to D1 and D2 medium spiny neurons in the 12-month-old Q175+/- mouse model of Huntington's Disease. PloS one. 13 [PubMed]
Graham BP, Saudargiene A, Cobb S. (2014). Spine head calcium as a measure of summed postsynaptic activity for driving synaptic plasticity. Neural computation. 26 [PubMed]
Grein S, Stepniewski M, Reiter S, Knodel MM, Queisser G. (2014). 1D-3D hybrid modeling-from multi-compartment models to full resolution models in space and time. Frontiers in neuroinformatics. 8 [PubMed]
Grossman N et al. (2013). The spatial pattern of light determines the kinetics and modulates backpropagation of optogenetic action potentials. Journal of computational neuroscience. 34 [PubMed]
Guet-McCreight A, Camiré O, Topolnik L, Skinner FK. (2016). Using a Semi-Automated Strategy to Develop Multi-Compartment Models That Predict Biophysical Properties of Interneuron-Specific 3 (IS3) Cells in Hippocampus. eNeuro. 3 [PubMed]
Gulledge AT, Carnevale NT, Stuart GJ. (2012). Electrical advantages of dendritic spines. PloS one. 7 [PubMed]
Günay C et al. (2015). Distal spike initiation zone location estimation by morphological simulation of ionic current filtering demonstrated in a novel model of an identified Drosophila motoneuron. PLoS computational biology. 11 [PubMed]
Hagen E et al. (2017). Focal Local Field Potential Signature of the Single-Axon Monosynaptic Thalamocortical Connection. The Journal of neuroscience : the official journal of the Society for Neuroscience. 37 [PubMed]
Hahn PJ, McIntyre CC. (2010). Modeling shifts in the rate and pattern of subthalamopallidal network activity during deep brain stimulation. Journal of computational neuroscience. 28 [PubMed]
Hallermann S, de Kock CP, Stuart GJ, Kole MH. (2012). State and location dependence of action potential metabolic cost in cortical pyramidal neurons. Nature neuroscience. 15 [PubMed]
Halnes G et al. (2016). Effect of Ionic Diffusion on Extracellular Potentials in Neural Tissue. PLoS computational biology. 12 [PubMed]
Hay E, Hill S, Schürmann F, Markram H, Segev I. (2011). Models of neocortical layer 5b pyramidal cells capturing a wide range of dendritic and perisomatic active properties. PLoS computational biology. 7 [PubMed]
Hay E, Schürmann F, Markram H, Segev I. (2013). Preserving axosomatic spiking features despite diverse dendritic morphology. Journal of neurophysiology. 109 [PubMed]
Hay E, Segev I. (2015). Dendritic Excitability and Gain Control in Recurrent Cortical Microcircuits. Cerebral cortex (New York, N.Y. : 1991). 25 [PubMed]
Heitmann S, Breakspear M. (2017). Chapter 1 Handbook for the Brain Dynamics Toolbox: Version 2018a.
Hernández OE, Zurek EE. (2013). Teaching and learning the Hodgkin-Huxley model based on software developed in NEURON's programming language hoc. BMC medical education. 13 [PubMed]
Hines ML, Davison AP, Muller E. (2009). NEURON and Python. Frontiers in neuroinformatics. 3 [PubMed]
Holmes WR, Huwe JA, Williams B, Rowe MH, Peterson EH. (2017). Models of utricular bouton afferents: role of afferent-hair cell connectivity in determining spike train regularity. Journal of neurophysiology. 117 [PubMed]
Huang S, Hong S, De Schutter E. (2015). Non-linear leak currents affect mammalian neuron physiology. Frontiers in cellular neuroscience. 9 [PubMed]
Hummos A, Franklin CC, Nair SS. (2014). Intrinsic mechanisms stabilize encoding and retrieval circuits differentially in a hippocampal network model. Hippocampus. 24 [PubMed]
Hummos A, Nair SS. (2017). An integrative model of the intrinsic hippocampal theta rhythm. PloS one. 12 [PubMed]
Kerr CC et al. (2012). Electrostimulation as a prosthesis for repair of information flow in a computer model of neocortex. IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society. 20 [PubMed]
Kerr CC et al. (2013). Cortical information flow in Parkinson's disease: a composite network/field model. Frontiers in computational neuroscience. 7 [PubMed]
Kim D, Paré D, Nair SS. (2013). Mechanisms contributing to the induction and storage of Pavlovian fear memories in the lateral amygdala. Learning & memory (Cold Spring Harbor, N.Y.). 20 [PubMed]
Kim H. (2017). Impact of the localization of dendritic calcium persistent inward current on the input-output properties of spinal motoneuron pool: a computational study. Journal of applied physiology (Bethesda, Md. : 1985). 123 [PubMed]
Kole MH et al. (2008). Action potential generation requires a high sodium channel density in the axon initial segment. Nature neuroscience. 11 [PubMed]
Kuck A, Stegeman DF, van Asseldonk EHF. (2017). Modeling trans-spinal direct current stimulation for the modulation of the lumbar spinal motor pathways Journal of neural engineering. 14 [PubMed]
Le Franc Y, Le Masson G. (2010). Multiple firing patterns in deep dorsal horn neurons of the spinal cord: computational analysis of mechanisms and functional implications. Journal of neurophysiology. 104 [PubMed]
Lee SH et al. (2014). Parvalbumin-positive basket cells differentiate among hippocampal pyramidal cells. Neuron. 82 [PubMed]
Li G, Cleland TA. (2013). A two-layer biophysical model of cholinergic neuromodulation in olfactory bulb. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]
Li G, Cleland TA. (2017). A coupled-oscillator model of olfactory bulb gamma oscillations. PLoS computational biology. 13 [PubMed]
Linaro D, Storace M, Giugliano M. (2011). Accurate and fast simulation of channel noise in conductance-based model neurons by diffusion approximation. PLoS computational biology. 7 [PubMed]
Lonardoni D et al. (2017). Recurrently connected and localized neuronal communities initiate coordinated spontaneous activity in neuronal networks. PLoS computational biology. 13 [PubMed]
Lytton WW, Neymotin SA, Hines ML. (2008). The virtual slice setup. Journal of neuroscience methods. 171 [PubMed]
Lytton WW, Neymotin SA, Wester JC, Contreras D. (2011). Neocortical simulation for epilepsy surgery guidance: Localization and intervention Computational Surgery and Dual Training.
Lytton WW, Orman R, Stewart M. (2008). Broadening of activity with flow across neural structures. Perception. 37 [PubMed]
Lytton WW et al. (2016). Simulation Neurotechnologies for Advancing Brain Research: Parallelizing Large Networks in NEURON. Neural computation. 28 [PubMed]
Major G, Polsky A, Denk W, Schiller J, Tank DW. (2008). Spatiotemporally graded NMDA spike/plateau potentials in basal dendrites of neocortical pyramidal neurons. Journal of neurophysiology. 99 [PubMed]
Mandge D, Manchanda R. (2018). A biophysically detailed computational model of urinary bladder small DRG neuron soma. PLoS computational biology. 14 [PubMed]
Manninen T, Hituri K, Kotaleski JH, Blackwell KT, Linne ML. (2010). Postsynaptic signal transduction models for long-term potentiation and depression. Frontiers in computational neuroscience. 4 [PubMed]
Markram H et al. (2015). Reconstruction and Simulation of Neocortical Microcircuitry. Cell. 163 [PubMed]
Mateos-Aparicio P, Murphy R, Storm JF. (2014). Complementary functions of SK and Kv7/M potassium channels in excitability control and synaptic integration in rat hippocampal dentate granule cells. The Journal of physiology. 592 [PubMed]
Mattioni M, Cohen U, Le Novère N. (2012). Neuronvisio: A Graphical User Interface with 3D Capabilities for NEURON. Frontiers in neuroinformatics. 6 [PubMed]
Mattioni M, Le Novère N. (2013). Integration of biochemical and electrical signaling-multiscale model of the medium spiny neuron of the striatum. PloS one. 8 [PubMed]
McDougal RA, Hines ML, Lytton WW. (2013). Reaction-diffusion in the NEURON simulator. Frontiers in neuroinformatics. 7 [PubMed]
Medan V, Mäki-Marttunen T, Sztarker J, Preuss T. (2018). Differential processing in modality-specific Mauthner cell dendrites. The Journal of physiology. 596 [PubMed]
Michalikova M, Remme MW, Kempter R. (2017). Spikelets in Pyramidal Neurons: Action Potentials Initiated in the Axon Initial Segment That Do Not Activate the Soma. PLoS computational biology. 13 [PubMed]
Morgan RJ, Santhakumar V, Soltesz I. (2007). Modeling the dentate gyrus. Progress in brain research. 163 [PubMed]
Moriyoshi Y, Takeuchi T. (1991). [Exocrine pancreatic function tests]. Rinsho byori. The Japanese journal of clinical pathology. Suppl 89 [PubMed]
Mukunda CL, Narayanan R. (2017). Degeneracy in the regulation of short-term plasticity and synaptic filtering by presynaptic mechanisms. The Journal of physiology. 595 [PubMed]
Munro E, Kopell N. (2012). Subthreshold somatic voltage in neocortical pyramidal cells can control whether spikes propagate from the axonal plexus to axon terminals: a model study. Journal of neurophysiology. 107 [PubMed]
Narayanan R, Johnston D. (2007). Long-term potentiation in rat hippocampal neurons is accompanied by spatially widespread changes in intrinsic oscillatory dynamics and excitability. Neuron. 56 [PubMed]
Narayanan R, Johnston D. (2008). The h channel mediates location dependence and plasticity of intrinsic phase response in rat hippocampal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]
Narayanan R, Johnston D. (2010). The h current is a candidate mechanism for regulating the sliding modification threshold in a BCM-like synaptic learning rule. Journal of neurophysiology. 104 [PubMed]
Ness TV, Remme MW, Einevoll GT. (2016). Active subthreshold dendritic conductances shape the local field potential. The Journal of physiology. 594 [PubMed]
Neymotin SA, Chadderdon GL, Kerr CC, Francis JT, Lytton WW. (2013). Reinforcement learning of two-joint virtual arm reaching in a computer model of sensorimotor cortex. Neural computation. 25 [PubMed]
Neymotin SA, Dura-Bernal S, Lakatos P, Sanger TD, Lytton WW. (2016). Multitarget Multiscale Simulation for Pharmacological Treatment of Dystonia in Motor Cortex. Frontiers in pharmacology. 7 [PubMed]
Neymotin SA et al. (2013). Ih tunes theta/gamma oscillations and cross-frequency coupling in an in silico CA3 model. PloS one. 8 [PubMed]
Neymotin SA, Jacobs KM, Fenton AA, Lytton WW. (2011). Synaptic information transfer in computer models of neocortical columns. Journal of computational neuroscience. 30 [PubMed]
Neymotin SA et al. (2011). Ketamine disrupts ? modulation of ? in a computer model of hippocampus. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]
Neymotin SA, Lee H, Fenton AA, Lytton WW. (2010). Interictal EEG discoordination in a rat seizure model. Journal of clinical neurophysiology : official publication of the American Electroencephalographic Society. 27 [PubMed]
Neymotin SA, Lee H, Park E, Fenton AA, Lytton WW. (2011). Emergence of physiological oscillation frequencies in a computer model of neocortex. Frontiers in computational neuroscience. 5 [PubMed]
Neymotin SA et al. (2016). Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex. Neuroscience. 316 [PubMed]
Neymotin SA et al. (2015). Neuronal calcium wave propagation varies with changes in endoplasmic reticulum parameters: a computer model. Neural computation. 27 [PubMed]
Neymotin SA et al. (2017). Optimizing computer models of corticospinal neurons to replicate in vitro dynamics. Journal of neurophysiology. 117 [PubMed]
Nichols EJ, Hutt A. (2015). Neural field simulator: two-dimensional spatio-temporal dynamics involving finite transmission speed. Frontiers in neuroinformatics. 9 [PubMed]
Oertner TG, Tian L, Grunditz A, Holbro N, Zuo Y. (2008). Supplementary data to Spine Neck Plasticity Controls Postsynaptic Calcium Signals through Electrical Compartmentalization J Neurosci. 28(50)
Oltedal L, Mørkve SH, Veruki ML, Hartveit E. (2007). Patch-clamp investigations and compartmental modeling of rod bipolar axon terminals in an in vitro thin-slice preparation of the mammalian retina. Journal of neurophysiology. 97 [PubMed]
Omurtag A, Lytton WW. (2010). Spectral method and high-order finite differences for the nonlinear cable equation. Neural computation. 22 [PubMed]
Ona-Jodar T, Gerkau NJ, Sara Aghvami S, Rose CR, Egger V. (2017). Two-Photon Na+ Imaging Reports Somatically Evoked Action Potentials in Rat Olfactory Bulb Mitral and Granule Cell Neurites. Frontiers in cellular neuroscience. 11 [PubMed]
Parekh R, Ascoli GA. (2013). Neuronal morphology goes digital: a research hub for cellular and system neuroscience. Neuron. 77 [PubMed]
Pashut T et al. (2011). Mechanisms of magnetic stimulation of central nervous system neurons. PLoS computational biology. 7 [PubMed]
Pelot NA, Behrend CE, Grill WM. (2017). Modeling the response of small myelinated axons in a compound nerve to kilohertz frequency signals. Journal of neural engineering. 14 [PubMed]
Podlaski WF et al. (2017). Mapping the function of neuronal ion channels in model and experiment. eLife. 6 [PubMed]
Popovic MA, Gao X, Carnevale NT, Zecevic D. (2014). Cortical dendritic spine heads are not electrically isolated by the spine neck from membrane potential signals in parent dendrites. Cerebral cortex (New York, N.Y. : 1991). 24 [PubMed]
Publio R, Oliveira RF, Roque AC. (2009). A computational study on the role of gap junctions and rod Ih conductance in the enhancement of the dynamic range of the retina. PloS one. 4 [PubMed]
Ray S, Bhalla US. (2008). PyMOOSE: Interoperable Scripting in Python for MOOSE. Frontiers in neuroinformatics. 2 [PubMed]
Reetz O, Stadler K, Strauss U. (2014). Protein kinase C activation mediates interferon-ß-induced neuronal excitability changes in neocortical pyramidal neurons. Journal of neuroinflammation. 11 [PubMed]
Reilly JP. (2016). Survey of numerical electrostimulation models. Physics in medicine and biology. 61 [PubMed]
Rowan MS, Neymotin SA. (2013). Synaptic Scaling Balances Learning in a Spiking Model of Neocortex Adaptive and Natural Computing Algorithms. 7824
Rowan MS, Neymotin SA, Lytton WW. (2014). Electrostimulation to reduce synaptic scaling driven progression of Alzheimer's disease. Frontiers in computational neuroscience. 8 [PubMed]
Royeck M et al. (2008). Role of axonal NaV1.6 sodium channels in action potential initiation of CA1 pyramidal neurons. Journal of neurophysiology. 100 [PubMed]
Rubin DB, Cleland TA. (2006). Dynamical mechanisms of odor processing in olfactory bulb mitral cells. Journal of neurophysiology. 96 [PubMed]
Rudnicki M, Hemmert W. (2017). High Entrainment Constrains Synaptic Depression Levels of an In vivo Globular Bushy Cell Model. Frontiers in computational neuroscience. 11 [PubMed]
Rumbell T, Kozloski J. (2019). Dimensions of control for subthreshold oscillations and spontaneous firing in dopamine neurons PLOS Computational Biology. 15
Rumbell TH et al. (2016). Automated evolutionary optimization of ion channel conductances and kinetics in models of young and aged rhesus monkey pyramidal neurons. Journal of computational neuroscience. 41 [PubMed]
Rössert C, Moore LE, Straka H, Glasauer S. (2011). Cellular and network contributions to vestibular signal processing: impact of ion conductances, synaptic inhibition, and noise. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]
Sailamul P, Jang J, Paik SB. (2017). Synaptic convergence regulates synchronization-dependent spike transfer in feedforward neural networks. Journal of computational neuroscience. 43 [PubMed]
Sanjay M, Neymotin SA, Krothapalli SB. (2015). Impaired dendritic inhibition leads to epileptic activity in a computer model of CA3. Hippocampus. 25 [PubMed]
Schmidt-Hieber C, Bischofberger J. (2010). Fast sodium channel gating supports localized and efficient axonal action potential initiation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]
Schmidt-Hieber C, Häusser M. (2013). Cellular mechanisms of spatial navigation in the medial entorhinal cortex. Nature neuroscience. 16 [PubMed]
Schmidt-Hieber C, Jonas P, Bischofberger J. (2007). Subthreshold dendritic signal processing and coincidence detection in dentate gyrus granule cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 27 [PubMed]
Schmidt-Hieber C et al. (2017). Active dendritic integration as a mechanism for robust and precise grid cell firing. Nature neuroscience. 20 [PubMed]
Schwarzacher SW, Cuntz H, Jedlicka P, Beining M, Mongiat LA. (2017). T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells eLife.
Sekulić V, Chen TC, Lawrence JJ, Skinner FK. (2015). Dendritic distributions of I h channels in experimentally-derived multi-compartment models of oriens-lacunosum/moleculare (O-LM) hippocampal interneurons. Frontiers in synaptic neuroscience. 7 [PubMed]
Singh C, Levy WB. (2017). A consensus layer V pyramidal neuron can sustain interpulse-interval coding. PloS one. 12 [PubMed]
Solinas SMG, Edelmann E, Leßmann V, Migliore M. (2019). A kinetic model for Brain-Derived Neurotrophic Factor mediated spike timing-dependent LTP. PLoS computational biology. 15 [PubMed]
Soltesz I, Armstrong C, Raikov I, Bezaire M, Burk K. (2016). SimTracker tool and code template to design, manage and analyze neural network model simulations in parallel NEURON bioRxiv.
Steephen JE, Manchanda R. (2009). Differences in biophysical properties of nucleus accumbens medium spiny neurons emerging from inactivation of inward rectifying potassium currents. Journal of computational neuroscience. 27 [PubMed]
Sterratt DC, Graham B, Gillies A, Willshaw D. (2011). Principles of Computational Modelling in Neuroscience, Cambridge University Press.
Stiefel KM, Englitz B, Sejnowski TJ. (2013). Origin of intrinsic irregular firing in cortical interneurons. Proceedings of the National Academy of Sciences of the United States of America. 110 [PubMed]
Szoboszlay M et al. (2016). Functional Properties of Dendritic Gap Junctions in Cerebellar Golgi Cells. Neuron. 90 [PubMed]
Tanaka T, Nakamura KC. (2019). Focal inputs are a potential origin of local field potential (LFP) in the brain regions without laminar structure. PloS one. 14 [PubMed]
Thomas EA, Petrou S. (2013). Network-specific mechanisms may explain the paradoxical effects of carbamazepine and phenytoin. Epilepsia. 54 [PubMed]
Tikidji-Hamburyan RA, El-Ghazawi TA, Narayana V, Bozkus Z. (2017). Software for Brain Network Simulations: A Comparative Study Front. Neuroinform..
Uhlrich DJ, Neymotin S, Manning KA. (2008). Data mining of time-domain features from neural extracellular field data Applic. of Comput. Intel. in Bioinf. and Biomed.: Current Trends and Open Problems. 151
Versace M, Ames H, Léveillé J, Fortenberry B, Gorchetchnikov A. (2008). KInNeSS: a modular framework for computational neuroscience. Neuroinformatics. 6 [PubMed]
Vervaeke K et al. (2010). Rapid desynchronization of an electrically coupled interneuron network with sparse excitatory synaptic input. Neuron. 67 [PubMed]
Wang XD, Hao J, Poo MM , Zhang XH. (2006). How does a neuron perform subtraction? - Arithmetic rules of synaptic integration of excitation and inhibition Advances in Neural Networks-ISNN 2006. 3971
Welday AC, Shlifer IG, Bloom ML, Zhang K, Blair HT. (2011). Cosine directional tuning of theta cell burst frequencies: evidence for spatial coding by oscillatory interference. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]
Wimmer VC et al. (2010). Axon initial segment dysfunction in a mouse model of genetic epilepsy with febrile seizures plus. The Journal of clinical investigation. 120 [PubMed]
Yamazaki T et al. (2011). Simulation Platform: a cloud-based online simulation environment. Neural networks : the official journal of the International Neural Network Society. 24 [PubMed]
Young RG, Castelfranco AM, Hartline DK. (2013). The "Lillie transition": models of the onset of saltatory conduction in myelinating axons. Journal of computational neuroscience. 34 [PubMed]
Yu N, Canavier CC. (2015). A Mathematical Model of a Midbrain Dopamine Neuron Identifies Two Slow Variables Likely Responsible for Bursts Evoked by SK Channel Antagonists and Terminated by Depolarization Block. Journal of mathematical neuroscience. 5 [PubMed]
Zeldenrust F, Chameau P, Wadman WJ. (2018). Spike and burst coding in thalamocortical relay cells. PLoS computational biology. 14 [PubMed]
Zhang X, Santaniello S. (2019). Role of cerebellar GABAergic dysfunctions in the origins of essential tremor Proceedings of the National Academy of Sciences.
van Elburg RA, van Ooyen A. (2009). Generalization of the event-based Carnevale-Hines integration scheme for integrate-and-fire models. Neural computation. 21 [PubMed]
van der Velden L, van Hooft JA, Chameau P. (2012). Altered dendritic complexity affects firing properties of cortical layer 2/3 pyramidal neurons in mice lacking the 5-HT3A receptor. Journal of neurophysiology. 108 [PubMed]