Model Concept: Action Potential Initiation

The model is used to investigate factors affecting action potential initiation.

  1. A detailed Purkinje cell model (Masoli et al 2015)
  2. A Model of Multiple Spike Initiation Zones in the Leech C-interneuron (Crisp 2009)
  3. A model of neurovascular coupling and the BOLD response (Mathias et al 2017, Kenny et al 2018)
  4. A set of reduced models of layer 5 pyramidal neurons (Bahl et al. 2012)
  5. A threshold equation for action potential initiation (Platkiewicz & Brette 2010)
  6. Action Potential initiation and backpropagation in Neocortical L5 Pyramidal Neuron (Hu et al. 2009)
  7. Action potential initiation in the olfactory mitral cell (Shen et al 1999)
  8. Action potential of mouse urinary bladder smooth muscle (Mahapatra et al 2018)
  9. Active dendrites and spike propagation in a hippocampal interneuron (Saraga et al 2003)
  10. AIS model of L5 cortical pyramidal neuron (Filipis et al., 2023)
  11. AP back-prop. explains threshold variability and rapid rise (McCormick et al. 2007, Yu et al. 2008)
  12. AP initiation and propagation in type II cochlear ganglion cell (Hossain et al 2005)
  13. Artificial neuron model (Izhikevich 2003, 2004, 2007)
  14. Axonal HH-model for temperature stimulation (Fribance et al 2016)
  15. Axonal NaV1.6 Sodium Channels in AP Initiation of CA1 Pyramidal Neurons (Royeck et al. 2008)
  16. Biophysically detailed model of the mouse sino-atrial node cell (Kharche et al. 2011)
  17. Biophysically realistic neuron models for simulation of cortical stimulation (Aberra et al. 2018)
  18. Breakdown of accmmodation in nerve: a possible role for INAp (Hennings et al 2005)
  19. CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003)
  20. CA1 pyramidal neuron: action potential backpropagation (Gasparini & Migliore 2015)
  21. CA1 pyramidal neuron: dendritic spike initiation (Gasparini et al 2004)
  22. CA1 pyramidal neuron: effects of Ih on distal inputs (Migliore et al 2004)
  23. CA1 pyramidal neuron: functional significance of axonal Kv7 channels (Shah et al. 2008)
  24. CA1 pyramidal neuron: integration of subthreshold inputs from PP and SC (Migliore 2003)
  25. CA1 pyramidal neuron: rebound spiking (Ascoli et al.2010)
  26. CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005)
  27. CA1 stratum radiatum interneuron multicompartmental model (Katona et al. 2011)
  28. CA3 pyramidal neuron (Lazarewicz et al 2002)
  29. CA3 pyramidal neuron (Safiulina et al. 2010)
  30. Cerebellar Golgi cells, dendritic processing, and synaptic plasticity (Masoli et al 2020)
  31. Cerebellar purkinje cell: K and Ca channels regulate APs (Miyasho et al 2001)
  32. Compartmental model of a mitral cell (Popovic et al. 2005)
  33. Competition for AP initiation sites in a circuit controlling simple learning (Cruz et al. 2007)
  34. Complex CA1-neuron to study AP initiation (Wimmer et al. 2010)
  35. Computational neuropharmacology of CA1 pyramidal neuron (Ferrante et al. 2008)
  36. Contribution of the axon initial segment to APs recorded extracellularly (Telenczuk et al 2018)
  37. Criticality,degeneracy in injury-induced changes in primary afferent excitability (Ratte et al 2014)
  38. DBS of a multi-compartment model of subthalamic nucleus projection neurons (Miocinovic et al. 2006)
  39. Dendritic Na+ spike initiation and backpropagation of APs in active dendrites (Nevian et al. 2007)
  40. Dendritic properties control energy efficiency of APs in cortical pyramidal cells (Yi et al 2017)
  41. Dendritica (Vetter et al 2001)
  42. Dentate Gyrus Feed-forward inhibition (Ferrante et al. 2009)
  43. Determinants of the intracellular and extracellular waveforms in DA neurons (Lopez-Jury et al 2018)
  44. Dopamine-modulated medium spiny neuron, reduced model (Humphries et al. 2009)
  45. Dopaminergic subtantia nigra neuron (Moubarak et al 2019)
  46. Dorsal root ganglion (primary somatosensory) neurons (Rho & Prescott 2012)
  47. DRG neuron models investigate how ion channel levels regulate firing properties (Zheng et al 2019)
  48. Dynamics of Spike Initiation (Prescott et al. 2008)
  49. Effects of Dopamine Modulation and KIR Inactivation in NAc Medium Spiny Neurons (Steephen 2011)
  50. Effects of KIR current inactivation in NAc Medium Spiny Neurons (Steephen and Manchanda 2009)
  51. Effects of neural morphology on global and focal NMDA-spikes (Poleg-Polsky 2015)
  52. Effects of the membrane AHP on the Lateral Superior Olive (LSO) (Zhou & Colburn 2010)
  53. Excitability of the soma in central nervous system neurons (Safronov et al 2000)
  54. Fast sodium channel gating in mossy fiber axons (Schmidt-Hieber et al. 2010)
  55. Febrile seizure-induced modifications to Ih (Chen et al 2001)
  56. Functional impact of dendritic branch point morphology (Ferrante et al., 2013)
  57. Globus pallidus neuron models with differing dendritic Na channel expression (Edgerton et al., 2010)
  58. Heterogeneous axon model (Zang et al, accepted)
  59. High frequency oscillations induced in three gap-junction coupled neurons (Tseng et al. 2008)
  60. Hodgkin–Huxley model with fractional gating (Teka et al. 2016)
  61. Human L2/3 pyramidal cells with low Cm values (Eyal et al. 2016)
  62. IA and IT interact to set first spike latency (Molineux et al 2005)
  63. Impact of fast Na channel inact. on AP threshold & synaptic integration (Platkiewicz & Brette 2011)
  64. Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007)
  65. Layer V pyramidal cell functions and schizophrenia genetics (Mäki-Marttunen et al 2019)
  66. Leech Heart (HE) Motor Neuron conductances contributions to NN activity (Lamb & Calabrese 2013)
  67. Leech Mechanosensory Neurons: Synaptic Facilitation by Reflected APs (Baccus 1998)
  68. MCCAIS model (multicompartmental cooperative AIS) (Öz et al 2015)
  69. Mechanisms of magnetic stimulation of central nervous system neurons (Pashut et al. 2011)
  70. Model of repetitive firing in Grueneberg ganglion olfactory neurons (Liu et al., 2012)
  71. Modeling interactions in Aplysia neuron R15 (Yu et al 2004)
  72. Morphological determinants of action potential dynamics in substantia nigra (Moubarak et al 2022)
  73. Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
  74. Multiscale model of olfactory receptor neuron in mouse (Dougherty 2009)
  75. MyFirstNEURON (Houweling, Sejnowski 1997)
  76. Na+ channel dependence of AP initiation in cortical pyramidal neuron (Kole et al. 2008)
  77. NAcc medium spiny neuron: effects of cannabinoid withdrawal (Spiga et al. 2010)
  78. Nav1.6 sodium channel model in globus pallidus neurons (Mercer et al. 2007)
  79. Neurite: electrophysiological-mechanical coupling simulation framework (Garcia-Grajales et al 2015)
  80. NMDA spikes in basal dendrites of L5 pyramidal neurons (Polsky et al. 2009)
  81. Nodes of Ranvier with left-shifted Nav channels (Boucher et al. 2012)
  82. Olfactory bulb cluster formation (Migliore et al. 2010)
  83. Olfactory bulb granule cell: effects of odor deprivation (Saghatelyan et al 2005)
  84. Olfactory Mitral cell: AP initiation modes (Chen et al 2002)
  85. Origin of heterogeneous spiking patterns in spinal dorsal horn neurons (Balachandar & Prescott 2018)
  86. Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
  87. Proximal inhibition of Renshaw cells (Bui et al 2005)
  88. Purkinje neuron network (Zang et al. 2020)
  89. Pyramidal neuron coincidence detection tuned by dendritic branching pattern (Schaefer et al 2003)
  90. Rat LGN Thalamocortical Neuron (Connelly et al 2015, 2016)
  91. Robust modulation of integrate-and-fire models (Van Pottelbergh et al 2018)
  92. Salamander retinal ganglian cells: morphology influences firing (Sheasby, Fohlmeister 1999)
  93. Selective control of cortical axonal spikes by a slowly inactivating K+ current (Shu et al. 2007)
  94. Sharpness of spike initiation in neurons explained by compartmentalization (Brette 2013)
  95. Simulated light response in rod photoreceptors (Liu and Kourennyi 2004)
  96. Site of impulse initiation in a neuron (Moore et al 1983)
  97. Sodium currents activate without a delay (Baranauskas and Martina 2006)
  98. Spectral method and high-order finite differences for nonlinear cable (Omurtag and Lytton 2010)
  99. Spike Initiation in Neocortical Pyramidal Neurons (Mainen et al 1995)
  100. Spike propagation and bouton activation in terminal arborizations (Luscher, Shiner 1990)
  101. Spike Response Model simulator (Jolivet et al. 2004, 2006, 2008)
  102. Spikelet generation and AP initiation in a L5 neocortical pyr neuron (Michalikova et al. 2017) Fig 1
  103. Spikelet generation and AP initiation in a simplified pyr neuron (Michalikova et al. 2017) Fig 3
  104. Spiking GridPlaceMap model (Pilly & Grossberg, PLoS One, 2013)
  105. Spontaneous firing caused by stochastic channel gating (Chow, White 1996)
  106. State and location dependence of action potential metabolic cost (Hallermann et al., 2012)
  107. Stimulated and physiologically induced APs: frequency and fiber diameter (Sadashivaiah et al 2018)
  108. Stochastic ion channels and neuronal morphology (Cannon et al. 2010)
  109. Stochastic layer V pyramidal neuron: interpulse interval coding and noise (Singh & Levy 2017)
  110. Stochastic versions of the Hodgkin-Huxley equations (Goldwyn, Shea-Brown 2011)
  111. Stochastic versions of the Hodgkin-Huxley equations (Goldwyn, Shea-Brown 2011) (pylab)
  112. Striatal Output Neuron (Mahon, Deniau, Charpier, Delord 2000)
  113. Superior paraolivary nucleus neuron (Kopp-Scheinpflug et al. 2011)
  114. Sympathetic Preganglionic Neurone (Briant et al. 2014)
  115. Synaptic gating at axonal branches, and sharp-wave ripples with replay (Vladimirov et al. 2013)
  116. Synaptic integration in a model of granule cells (Gabbiani et al 1994)
  117. Thalamic network model of deep brain stimulation in essential tremor (Birdno et al. 2012)
  118. Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996)
  119. The basis of sharp spike onset in standard biophysical models (Telenczuk et al 2017)
  120. Tonic activation of extrasynaptic NMDA-R promotes bistability (Gall & Dupont 2020)
  121. Tonic neuron in spinal lamina I: prolongation of subthreshold depol. (Prescott and De Koninck 2005)
  122. Voltage- and Branch-specific Climbing Fiber Responses in Purkinje Cells (Zang et al 2018)
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