Model Type: Dendrite

  1. 3D model of the olfactory bulb (Migliore et al. 2014)
  2. A 1000 cell network model for Lateral Amygdala (Kim et al. 2013)
  3. A comparative computer simulation of dendritic morphology (Donohue and Ascoli 2008)
  4. A dendritic disinhibitory circuit mechanism for pathway-specific gating (Yang et al. 2016)
  5. A Layer V CCS type pyramidal cell, inhibitory synapse current conduction (Kubota Y et al., 2015)
  6. A model of unitary responses from A/C and PP synapses in CA3 pyramidal cells (Baker et al. 2010)
  7. A neurite to measure ePSP and AP amplitude after passive spread (DeMaegd & Stein, 2021)
  8. A set of reduced models of layer 5 pyramidal neurons (Bahl et al. 2012)
  9. A simplified cerebellar Purkinje neuron (the PPR model) (Brown et al. 2011)
  10. Active dendrites shape signaling microdomains in hippocampal neurons (Basak & Narayanan 2018)
  11. Activity dependent changes in dendritic spine density and spine structure (Crook et al. 2007)
  12. Axon growth model (Diehl et al. 2016)
  13. Biologically Constrained Basal Ganglia model (BCBG model) (Lienard, Girard 2014)
  14. CA1 oriens alveus interneurons: signaling properties (Minneci et al. 2007)
  15. CA1 pyramidal neuron dendritic spine with plasticity (O`Donnell et al. 2011)
  16. CA1 pyramidal neuron: action potential backpropagation (Gasparini & Migliore 2015)
  17. CA1 pyramidal neuron: Dendritic Na+ spikes are required for LTP at distal synapses (Kim et al 2015)
  18. CA1 pyramidal neuron: dendritic spike initiation (Gasparini et al 2004)
  19. CA1 pyramidal neuron: effects of Ih on distal inputs (Migliore et al 2004)
  20. CA1 pyramidal neuron: effects of R213Q and R312W Kv7.2 mutations (Miceli et al. 2013)
  21. CA1 pyramidal neuron: h channel-dependent deficit of theta oscill. resonance (Marcelin et al. 2008)
  22. CA1 pyramidal neuron: integration of subthreshold inputs from PP and SC (Migliore 2003)
  23. CA1 pyramidal neuron: nonlinear a5-GABAAR controls synaptic NMDAR activation (Schulz et al 2018)
  24. CA1 pyramidal neuron: Persistent Na current mediates steep synaptic amplification (Hsu et al 2018)
  25. CA1 pyramidal neuron: rebound spiking (Ascoli et al.2010)
  26. Ca1 pyramidal neuron: reduction model (Marasco et al. 2012)
  27. CA1 pyramidal neuron: schizophrenic behavior (Migliore et al. 2011)
  28. CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005)
  29. CA1 pyramidal neuron: synaptic plasticity during theta cycles (Saudargiene et al. 2015)
  30. CA1 pyramidal neurons: binding properties and the magical number 7 (Migliore et al. 2008)
  31. CA1 pyramidal neurons: effect of external electric field from power lines (Cavarretta et al. 2014)
  32. CA1 pyramidal neurons: effects of a Kv7.2 mutation (Miceli et al. 2009)
  33. CA1 pyramidal neurons: effects of Alzheimer (Culmone and Migliore 2012)
  34. CA3 hippocampal pyramidal neuron with voltage-clamp intrinsic conductance data (Traub et al 1991)
  35. CA3 pyramidal neuron (Safiulina et al. 2010)
  36. CA3 pyramidal neuron: firing properties (Hemond et al. 2008)
  37. Ca3 pyramidal neuron: membrane response near rest (Hemond et al. 2009)
  38. CA3 pyramidal neurons: Kv1.2 mediates modulation of cortical inputs (Hyun et al., 2015)
  39. Calcium dynamics depend on dendritic diameters (Anwar et al. 2014)
  40. Calcium waves and mGluR-dependent synaptic plasticity in CA1 pyr. neurons (Ashhad & Narayanan 2013)
  41. Cerebellum granule cell FHF (Dover et al. 2016)
  42. Cerebellum Purkinje cell: dendritic ion channels activated by climbing fibre (Ait Ouares et al 2019)
  43. Chirp stimulus responses in a morphologically realistic model (Narayanan and Johnston, 2007)
  44. Coincident glutamatergic depolarization effects on Cl- dynamics (Lombardi et al, 2021)
  45. Coincident signals in Olfactory Bulb Granule Cell spines (Aghvami et al 2019)
  46. Compartmental models of growing neurites (Graham and van Ooyen 2004)
  47. Compartmentalization of GABAergic inhibition by dendritic spines (Chiu et al. 2013)
  48. Comprehensive models of human cortical pyramidal neurons (Eyal et al 2018)
  49. Continuous time stochastic model for neurite branching (van Elburg 2011)
  50. Continuum model of tubulin-driven neurite elongation (Graham et al 2006)
  51. Controlling KCa channels with different Ca2+ buffering models in Purkinje cell (Anwar et al. 2012)
  52. Dendritic action potentials and computation in human layer 2/3 cortical neurons (Gidon et al 2020)
  53. Dendritic action potentials and computation in human layer 2/3 cortical neurons (Gidon et al 2020)
  54. Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010)
  55. Dendritic properties control energy efficiency of APs in cortical pyramidal cells (Yi et al 2017)
  56. Dendritica (Vetter et al 2001)
  57. Dendro-dendritic synaptic circuit (Shepherd Brayton 1979)
  58. Dentate granule cell: mAHP & sAHP; SK & Kv7/M channels (Mateos-Aparicio et al., 2014)
  59. Dentate Gyrus model including Granule cells with dendritic compartments (Chavlis et al 2017)
  60. Detailed passive cable model of Dentate Gyrus Basket Cells (Norenberg et al. 2010)
  61. Determinants of fast calcium dynamics in dendritic spines and dendrites (Cornelisse et al. 2007)
  62. Determinants of the intracellular and extracellular waveforms in DA neurons (Lopez-Jury et al 2018)
  63. Discrimination on behavioral time-scales mediated by reaction-diffusion in dendrites (Bhalla 2017)
  64. Distinct integration properties of noisy inputs in active dendritic subunits (Poleg-Polsky 2019)
  65. Double cable myelinated axon (Layer 5 pyramidal neuron; Cohen et al 2020)
  66. Early-onset epileptic encephalopathy (Miceli et al. 2015)
  67. Effect of the initial synaptic state on the probability to induce LTP and LTD (Migliore et al. 2015)
  68. Effects of neural morphology on global and focal NMDA-spikes (Poleg-Polsky 2015)
  69. Effects of synaptic location and timing on synaptic integration (Rall 1964)
  70. ELL Medium Ganglion Cell (Mormyrid fish) (Muller et al, 2023)
  71. ELL Medium Ganglion cell (Muller et al 2019)
  72. Ephaptic coupling in passive cable and MSO neuron models (Goldwyn & Rinzel 2016)
  73. Excitatory synaptic interactions in pyramidal neuron dendrites (Behabadi et al. 2012)
  74. Factors contribution to GDP-induced [Cl-]i transients (Lombardi et al 2019)
  75. Four cortical interneuron subtypes (Kubota et al. 2011)
  76. Functional impact of dendritic branch point morphology (Ferrante et al., 2013)
  77. Gamma genesis in the basolateral amygdala (Feng et al 2019)
  78. Gap junction coupled network of striatal fast spiking interneurons (Hjorth et al. 2009)
  79. Gating of steering signals through phasic modulation of reticulospinal neurons (Kozlov et al. 2014)
  80. Generation of granule cell dendritic morphology (Schneider et al. 2014)
  81. Geometry-induced features of current transfer in neuronal dendrites (Korogod, Kulagina 1998)
  82. Globus pallidus neuron models with differing dendritic Na channel expression (Edgerton et al., 2010)
  83. Glutamate mediated dendritic and somatic plateau potentials in cortical L5 pyr cells (Gao et al '20)
  84. Hippocampal CA1 microcircuit model including somatic and dendritic inhibition
  85. Hippocampus CA1 Interneuron Specific 3 (IS3) in vivo-like virtual NN simulations (Luo et al 2020)
  86. Human L2/3 pyramidal cells with low Cm values (Eyal et al. 2016)
  87. Impact of dendritic atrophy on intrinsic and synaptic excitability (Narayanan & Chattarji, 2010)
  88. Impact on backpropagation of the spatial heterogeneity of sodium channel kinetics in the axon initial segment (Barlow et al., in press)
  89. Ionic mechanisms of dendritic spikes (Almog and Korngreen 2014)
  90. L5 PFC microcircuit used to study persistent activity (Papoutsi et al. 2014, 2013)
  91. Large scale model of the olfactory bulb (Yu et al., 2013)
  92. LGMD - ON excitation to dendritic field C
  93. LGMD impedance (Dewell & Gabbiani 2019)
  94. Mechanisms underlying subunit independence in pyramidal neuron dendrites (Behabadi and Mel 2014)
  95. Microcircuits of L5 thick tufted pyramidal cells (Hay & Segev 2015)
  96. Model of calcium oscillations in olfactory cilia (Reidl et al. 2006)
  97. Morphological determinants of action potential dynamics in substantia nigra (Moubarak et al 2022)
  98. Morphological determinants of dendritic arborization neurons in Drosophila larva (Nanda et al 2018)
  99. Multiplexed coding in Purkinje neuron dendrites (Zang and De Schutter 2021)
  100. Multiplication by NMDA receptors in Direction Selective Ganglion cells (Poleg-Polsky & Diamond 2016)
  101. Multiscale model of olfactory receptor neuron in mouse (Dougherty 2009)
  102. Na+ Signals in olfactory bulb neurons (granule cell model) (Ona-Jodar et al. 2017)
  103. NAcc medium spiny neuron: effects of cannabinoid withdrawal (Spiga et al. 2010)
  104. Neurite: electrophysiological-mechanical coupling simulation framework (Garcia-Grajales et al 2015)
  105. NeuroGPU example on L5_TTPC1_cADpyr232_1 (Ben-Shalom 2022)(Ramaswamy et al., 2015)
  106. Neuronal dendrite calcium wave model (Neymotin et al, 2015)
  107. Nonlinear dendritic processing in barrel cortex spiny stellate neurons (Lavzin et al. 2012)
  108. Olfactory bulb granule cell: effects of odor deprivation (Saghatelyan et al 2005)
  109. Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
  110. Olfactory receptor neuron model (Dougherty et al 2005)
  111. Optical stimulation of a channelrhodopsin-2 positive pyramidal neuron model (Foutz et al 2012)
  112. Parametric computation and persistent gamma in a cortical model (Chambers et al. 2012)
  113. Preserving axosomatic spiking features despite diverse dendritic morphology (Hay et al., 2013)
  114. Principles of Computational Modelling in Neuroscience (Book) (Sterratt et al. 2011)
  115. Python-based toolkits for STEPS (Chen and De Schutter 2014)
  116. Region-specific atrophy in dendrites (Narayanan, Narayan, Chattarji, 2005)
  117. Sensory-evoked responses of L5 pyramidal tract neurons (Egger et al 2020)
  118. Somatodendritic consistency check for temporal feature segmentation (Asabuki & Fukai 2020)
  119. Specific inhibition of dendritic plateau potential in striatal projection neurons (Du et al 2017)
  120. Spiny Projection Neuron Ca2+ based plasticity is robust to in vivo spike train (Dorman&Blackwell)
  121. STDP and BDNF in CA1 spines (Solinas et al. 2019)
  122. Stochastic calcium mechanisms cause dendritic calcium spike variability (Anwar et al. 2013)
  123. Striatal D1R medium spiny neuron, including a subcellular DA cascade (Lindroos et al 2018)
  124. Striatal NN model of MSNs and FSIs investigated effects of dopamine depletion (Damodaran et al 2015)
  125. Striatal Spiny Projection Neuron (SPN) plasticity rule (Jedrzejewska-Szmek et al 2016)
  126. Subiculum network model with dynamic chloride/potassium homeostasis (Buchin et al 2016)
  127. Synaptic gating at axonal branches, and sharp-wave ripples with replay (Vladimirov et al. 2013)
  128. Synaptic integration in tuft dendrites of layer 5 pyramidal neurons (Larkum et al. 2009)
  129. Synaptic integration of an identified nonspiking interneuron in crayfish (Takashima et al 2006)
  130. Using Strahler's analysis to reduce realistic models (Marasco et al, 2013)
  131. Vertical System (VS) tangential cells network model (Trousdale et al. 2014)
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